Class information for:
Level 1: NEF//HIV 1 NEF//HIV NEF

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
9070 1190 51.9 94%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
29 3       HIV//VIROLOGY//HIV 1 108954
10 2             AIDS RESEARCH AND HUMAN RETROVIRUSES//VIROLOGY//HIV 1 39664
9070 1                   NEF//HIV 1 NEF//HIV NEF 1190

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NEF authKW 3327569 19% 58% 222
2 HIV 1 NEF authKW 310995 2% 61% 20
3 HIV NEF authKW 209532 1% 58% 14
4 NEF PROTEIN authKW 128282 1% 50% 10
5 AIDS CELLULAR BIOL UNIT address 78571 1% 44% 7
6 AIDS IMMUNOPATHOGENESIS authKW 76975 0% 100% 3
7 HIV 1 NEF PROTEIN authKW 76975 0% 100% 3
8 URA CNRS 1157 address 76975 0% 100% 3
9 VIRION INFECTIVITY authKW 76975 0% 100% 3
10 NEF GENE authKW 71269 0% 56% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Virology 62474 55% 0% 652
2 Immunology 2970 25% 0% 297
3 Infectious Diseases 1883 12% 0% 148
4 Cell Biology 733 14% 0% 171
5 Biochemistry & Molecular Biology 727 24% 0% 284
6 Medicine, Research & Experimental 81 4% 0% 51
7 Biophysics 67 4% 0% 46
8 Biotechnology & Applied Microbiology 43 4% 0% 49
9 Microbiology 22 3% 0% 40
10 Hematology 15 2% 0% 23

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 AIDS CELLULAR BIOL UNIT 78571 1% 44% 7
2 URA CNRS 1157 76975 0% 100% 3
3 CONFOCAL LASER MICROSCOPY CORE IL 51317 0% 100% 2
4 U414 INSERM 51317 0% 100% 2
5 VIRUS IMMUN GRP 49337 0% 38% 5
6 MACFARLANE BURNET MED 46183 0% 60% 3
7 AIDS MOL BIOL UNIT 40084 0% 31% 5
8 INTEGRAT VIROL 36939 1% 24% 6
9 NAT HIV VIROL 34210 0% 67% 2
10 2D03 25658 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF VIROLOGY 34307 19% 1% 230
2 AIDS RESEARCH AND HUMAN RETROVIRUSES 26946 6% 1% 75
3 RESEARCH IN VIROLOGY 25761 2% 4% 23
4 RETROVIROLOGY 16502 2% 2% 28
5 VIROLOGY 15168 9% 1% 105
6 CURRENT HIV RESEARCH 12477 2% 2% 20
7 JOURNAL OF GENERAL VIROLOGY 1570 2% 0% 29
8 AIDS 1159 2% 0% 20
9 TRAFFIC 1066 1% 0% 9
10 IMMUNITY 1057 1% 0% 12

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 NEF 3327569 19% 58% 222 Search NEF Search NEF
2 HIV 1 NEF 310995 2% 61% 20 Search HIV+1+NEF Search HIV+1+NEF
3 HIV NEF 209532 1% 58% 14 Search HIV+NEF Search HIV+NEF
4 NEF PROTEIN 128282 1% 50% 10 Search NEF+PROTEIN Search NEF+PROTEIN
5 AIDS IMMUNOPATHOGENESIS 76975 0% 100% 3 Search AIDS+IMMUNOPATHOGENESIS Search AIDS+IMMUNOPATHOGENESIS
6 HIV 1 NEF PROTEIN 76975 0% 100% 3 Search HIV+1+NEF+PROTEIN Search HIV+1+NEF+PROTEIN
7 VIRION INFECTIVITY 76975 0% 100% 3 Search VIRION+INFECTIVITY Search VIRION+INFECTIVITY
8 NEF GENE 71269 0% 56% 5 Search NEF+GENE Search NEF+GENE
9 HCK 67733 1% 20% 13 Search HCK Search HCK
10 ANTIRETROVIRAL DRUG DISCOVERY 51317 0% 100% 2 Search ANTIRETROVIRAL+DRUG+DISCOVERY Search ANTIRETROVIRAL+DRUG+DISCOVERY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 ARHEL, NJ , KIRCHHOFF, F , (2009) IMPLICATIONS OF NEF: HOST CELL INTERACTIONS IN VIRAL PERSISTENCE AND PROGRESSION TO AIDS.HIV INTERACTIONS WITH HOST CELL PROTEINS. VOL. 339. ISSUE . P. 147 -175 158 81% 42
2 BASMACIOGULLARI, S , PIZZATO, M , (2014) THE ACTIVITY OF NEF ON HIV-1 INFECTIVITY.FRONTIERS IN MICROBIOLOGY. VOL. 5. ISSUE . P. - 132 80% 16
3 PEREIRA, EA , DASILVA, LLP , (2016) HIV-1 NEF: TAKING CONTROL OF PROTEIN TRAFFICKING.TRAFFIC. VOL. 17. ISSUE 9. P. 976 -996 138 72% 1
4 ARORA, VK , FREDERICKSEN, BL , GARCIA, JV , (2002) NEF: AGENT OF CELL SUBVERSION.MICROBES AND INFECTION. VOL. 4. ISSUE 2. P. 189 -199 119 94% 64
5 LAGUETTE, N , BREGNARD, C , BENICHOU, S , BASMACIOGULLARI, S , (2010) HUMAN IMMUNODEFICIENCY VIRUS (HIV) TYPE-1, HIV-2 AND SIMIAN IMMUNODEFICIENCY VIRUS NEF PROTEINS.MOLECULAR ASPECTS OF MEDICINE. VOL. 31. ISSUE 5. P. 418 -433 127 68% 34
6 FOSTER, JL , DENIAL, SJ , TEMPLE, BRS , GARCIA, JV , (2011) MECHANISMS OF HIV-1 NEF FUNCTION AND INTRACELLULAR SIGNALING.JOURNAL OF NEUROIMMUNE PHARMACOLOGY. VOL. 6. ISSUE 2. P. 230 -246 102 82% 28
7 RENKEMA, GH , SAKSELA, K , (2000) INTERACTIONS OF HIV-1 NEF WITH CELLULAR SIGNAL TRANSDUCING PROTEINS.FRONTIERS IN BIOSCIENCE-LANDMARK. VOL. 5. ISSUE . P. D268-D283 130 81% 119
8 KIRCHHOFF, F , SCHINDLER, M , SPECHT, A , ARHEL, N , MUNCH, J , (2008) ROLE OF NEF IN PRIMATE LENTIVIRAL IMMUNOPATHOGENESIS.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 65. ISSUE 17. P. 2621 -2636 119 70% 65
9 MARKLE, TJ , MWIMANZI, P , BROCKMAN, MA , (2013) HIV-1 NEF AND T-CELL ACTIVATION: A HISTORY OF CONTRADICTIONS.FUTURE VIROLOGY. VOL. 8. ISSUE 4. P. 391-404 114 73% 1
10 ROETH, JF , COLLINS, KL , (2006) HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 NEF: ADAPTING TO INTRACELLULAR TRAFFICKING PATHWAYS.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 70. ISSUE 2. P. 548 -+ 112 69% 130

Classes with closest relation at Level 1


Rank Class id link
1 17542 VPU//TETHERIN//BST 2
2 3332 SIV//SHIV//SIMIAN IMMUNODEFICIENCY VIRUS
3 12511 VPR//SAMHD1//VPX
4 1456 PARTNERS AIDS//DORIS DUKE MED//HIV PATHOGENESIS PROGRAMME
5 9126 NAIVE AND MEMORY CD4 T CELLS//SECC INMUNOPEDIAT//BIOSISTEMA 1
6 3841 VIRUS CELL INTERACT SECT//GAG//HIV DRUG ISTANCE PROGRAM
7 4242 TAT//TAT PROTEIN//HIV 1 TAT
8 21102 ANTI CD3 CD28 COATED BEADS//CD8 CELL ANTIVIRAL ACTIVITY//CD8 CELL ANTIVIRAL RESPONSES
9 9090 VIF//APOBEC3G//APOBEC3
10 12194 REV//RRE//REV PROTEIN

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