Class information for:
Level 1: IMMUNOLOGICAL SYNAPSE//LYMPHOCYTE INTERACT//PROGRAM MOL PATHOGENESIS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
4230 1824 55.2 95%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
10 3       IMMUNOLOGY//JOURNAL OF IMMUNOLOGY//IMMUNOL 134299
741 2             ANTIGEN PRESENTATION//IMMUNOLOGY//ANTIGEN PROCESSING 12555
4230 1                   IMMUNOLOGICAL SYNAPSE//LYMPHOCYTE INTERACT//PROGRAM MOL PATHOGENESIS 1824

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 IMMUNOLOGICAL SYNAPSE authKW 656345 5% 41% 96
2 LYMPHOCYTE INTERACT address 244032 1% 54% 27
3 PROGRAM MOL PATHOGENESIS address 209487 2% 38% 33
4 IMMUNE SYNAPSE authKW 140225 1% 31% 27
5 ALTERED PEPTIDE LIGAND authKW 116300 2% 24% 29
6 SECT DYNAM MOL INTERACT LYMPHOCYTAI address 107127 0% 80% 8
7 MICROCLUSTER authKW 98705 1% 35% 17
8 TCR TRIGGERING authKW 75323 0% 75% 6
9 T CELL RECEPTOR authKW 71527 5% 4% 100
10 T CELL ACTIVATION authKW 68040 4% 5% 76

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Immunology 36870 67% 0% 1225
2 Cell Biology 2161 19% 0% 347
3 Medicine, Research & Experimental 373 6% 0% 118
4 Biochemistry & Molecular Biology 269 15% 0% 265
5 Biophysics 175 5% 0% 85
6 Mathematical & Computational Biology 140 2% 0% 35
7 Biology 109 3% 0% 53
8 Biochemical Research Methods 20 2% 0% 39
9 Hematology 15 2% 0% 32
10 Cell & Tissue Engineering 4 0% 0% 4

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LYMPHOCYTE INTERACT 244032 1% 54% 27
2 PROGRAM MOL PATHOGENESIS 209487 2% 38% 33
3 SECT DYNAM MOL INTERACT LYMPHOCYTAI 107127 0% 80% 8
4 SKIRBALL BIOMOL MED 54447 3% 6% 59
5 BIOL MEMBRANE BIOPHYS 50217 0% 100% 3
6 IMMUNODYNAM GRP 43037 0% 43% 6
7 LYMPHOCYTE INTERACT GRP 37662 0% 75% 3
8 SKIRBALL MOL MED 34867 0% 42% 5
9 LYMPHOCYTE CELL BIOL UNIT 34166 0% 29% 7
10 HELENE MARTIN KIMMEL BIOL MED 33478 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 IMMUNITY 44014 5% 3% 95
2 NATURE IMMUNOLOGY 27250 3% 3% 60
3 JOURNAL OF IMMUNOLOGY 22074 15% 1% 266
4 IMMUNOLOGICAL REVIEWS 12970 3% 2% 49
5 FRONTIERS IN IMMUNOLOGY 12672 3% 2% 47
6 JOURNAL OF EXPERIMENTAL MEDICINE 9550 5% 1% 84
7 NATURE REVIEWS IMMUNOLOGY 8277 1% 2% 23
8 CURRENT OPINION IN IMMUNOLOGY 7398 2% 1% 35
9 SCIENCE SIGNALING 6736 1% 2% 25
10 EUROPEAN JOURNAL OF IMMUNOLOGY 6158 4% 1% 70

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 IMMUNOLOGICAL SYNAPSE 656345 5% 41% 96 Search IMMUNOLOGICAL+SYNAPSE Search IMMUNOLOGICAL+SYNAPSE
2 IMMUNE SYNAPSE 140225 1% 31% 27 Search IMMUNE+SYNAPSE Search IMMUNE+SYNAPSE
3 ALTERED PEPTIDE LIGAND 116300 2% 24% 29 Search ALTERED+PEPTIDE+LIGAND Search ALTERED+PEPTIDE+LIGAND
4 MICROCLUSTER 98705 1% 35% 17 Search MICROCLUSTER Search MICROCLUSTER
5 TCR TRIGGERING 75323 0% 75% 6 Search TCR+TRIGGERING Search TCR+TRIGGERING
6 T CELL RECEPTOR 71527 5% 4% 100 Search T+CELL+RECEPTOR Search T+CELL+RECEPTOR
7 T CELL ACTIVATION 68040 4% 5% 76 Search T+CELL+ACTIVATION Search T+CELL+ACTIVATION
8 T CELL RECEPTOR DOWN REGULATION 66957 0% 100% 4 Search T+CELL+RECEPTOR+DOWN+REGULATION Search T+CELL+RECEPTOR+DOWN+REGULATION
9 KINETIC PROOFREADING 61362 1% 33% 11 Search KINETIC+PROOFREADING Search KINETIC+PROOFREADING
10 TCR ANTAGONISM 52306 0% 63% 5 Search TCR+ANTAGONISM Search TCR+ANTAGONISM

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 XIE, JM , TATO, CM , DAVIS, MM , (2013) HOW THE IMMUNE SYSTEM TALKS TO ITSELF: THE VARIED ROLE OF SYNAPSES.IMMUNOLOGICAL REVIEWS. VOL. 251. ISSUE . P. 65-79 84 81% 19
2 COMRIE, WA , BURKHARDT, JK , (2016) ACTION AND TRACTION: CYTOSKELETAL CONTROL OF RECEPTOR TRIGGERING AT THE IMMUNOLOGICAL SYNAPSE.FRONTIERS IN IMMUNOLOGY. VOL. 7. ISSUE . P. 1 -25 123 47% 3
3 YOKOSUKA, T , SAITO, T , (2010) THE IMMUNOLOGICAL SYNAPSE, TCR MICROCLUSTERS, AND T CELL ACTIVATION.IMMUNOLOGICAL SYNAPSE. VOL. 340. ISSUE . P. 81 -107 90 62% 60
4 YU, Y , SMOLIGOVETS, AA , GROVES, JT , (2013) MODULATION OF T CELL SIGNALING BY THE ACTIN CYTOSKELETON.JOURNAL OF CELL SCIENCE. VOL. 126. ISSUE 5. P. 1049 -1058 79 65% 26
5 LEVER, M , MAINI, PK , VAN DER MERWE, PA , DUSHEK, O , (2014) PHENOTYPIC MODELS OF T CELL ACTIVATION.NATURE REVIEWS IMMUNOLOGY. VOL. 14. ISSUE 9. P. 619 -629 68 74% 15
6 THAULAND, TJ , PARKER, DC , (2010) DIVERSITY IN IMMUNOLOGICAL SYNAPSE STRUCTURE.IMMUNOLOGY. VOL. 131. ISSUE 4. P. 466 -472 66 88% 19
7 ZARNITSYNA, V , ZHU, C , (2012) T CELL TRIGGERING: INSIGHTS FROM 2D KINETICS ANALYSIS OF MOLECULAR INTERACTIONS.PHYSICAL BIOLOGY. VOL. 9. ISSUE 4. P. - 102 53% 10
8 DUSTIN, ML , GROVES, JT , (2012) RECEPTOR SIGNALING CLUSTERS IN THE IMMUNE SYNAPSE.ANNUAL REVIEW OF BIOPHYSICS, VOL 41. VOL. 41. ISSUE . P. 543-556 55 81% 59
9 LIU, WL , WANG, HP , XU, CQ , (2016) ANTIGEN RECEPTOR NANOCLUSTERS: SMALL UNITS WITH BIG FUNCTIONS.TRENDS IN IMMUNOLOGY. VOL. 37. ISSUE 10. P. 680 -689 56 85% 0
10 VALITUTTI, S , COOMBS, D , DUPRE, L , (2010) THE SPACE AND TIME FRAMES OF T CELL ACTIVATION AT THE IMMUNOLOGICAL SYNAPSE.FEBS LETTERS. VOL. 584. ISSUE 24. P. 4851 -4857 63 82% 12

Classes with closest relation at Level 1


Rank Class id link
1 13833 PROT CRYSTALLOG UNIT//T CELL RECEPTOR//PEPTIDE MHC
2 13788 SLP 76//ADAP//SECT LYMPHOCYTE SIGNALING
3 16097 CD3 GAMMA//CD3 EPSILON//CORE PEPTIDE
4 15024 FIBROBLASTIC RETICULAR CELLS//INTRAVITAL IMAGING//LYMPHOCYTE BIOL SECT
5 33425 ARTIFICIAL ANTIGEN PRESENTING CELLS//ANTIGEN SPECIFIC CD8T CELLS//HLA A2 IG
6 4882 P56LCK//LCK//LCK INHIBITOR
7 28653 IN SITU TETRAMER STAINING//CONDITIONAL LIGANDS//EX VIVO PHENOTYPING
8 35516 BIFUNCTIONAL PEPTIDE INHIBITOR//TYKESON MS//PROTEOLIPID PEPTIDE
9 22654 VAV//VAV1//VAV PROTO ONCOGENE
10 4314 T CELL DEVELOPMENT//THYMIC SELECTION//PRE T CELL RECEPTOR

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