Class information for:
Level 1: CROWN GALL//TI PLASMID//AGROBACTERIUM VITIS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
2517 2221 40.3 66%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
2608 2             CROWN GALL//TI PLASMID//BACTERIAL CONJUGATION 3584
2517 1                   CROWN GALL//TI PLASMID//AGROBACTERIUM VITIS 2221

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CROWN GALL authKW 923177 4% 69% 98
2 TI PLASMID authKW 602640 2% 80% 55
3 AGROBACTERIUM VITIS authKW 453085 2% 80% 41
4 AGROBACTERIUM authKW 386882 7% 18% 160
5 AGROBACTERIUM TUMEFACIENS authKW 349468 8% 14% 188
6 OPINES authKW 179593 1% 47% 28
7 T DNA INTEGRATION authKW 177346 1% 56% 23
8 T DNA authKW 169053 2% 23% 54
9 VIRE2 authKW 165940 1% 93% 13
10 VIR GENES authKW 147128 1% 63% 17

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Plant Sciences 16748 38% 0% 853
2 Microbiology 7698 25% 0% 562
3 Biochemistry & Molecular Biology 3826 36% 0% 807
4 Genetics & Heredity 1996 14% 0% 302
5 Horticulture 1955 5% 0% 113
6 Biotechnology & Applied Microbiology 1838 13% 0% 297
7 Cell Biology 600 10% 0% 229
8 Agronomy 324 4% 0% 85
9 Biology 159 3% 0% 69
10 Developmental Biology 17 1% 0% 21

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PANT PATHOL 30929 0% 75% 3
2 BINNS 27493 0% 100% 2
3 EXPT PHYTOPATHOL 27493 0% 100% 2
4 PURDUE GENET PROGRAM 27489 0% 50% 4
5 DAVIS CROWN GALL GRP 24736 0% 30% 6
6 VALGRP MOL GENET 18328 0% 67% 2
7 AD AT NANOSTRUCT NANODEVICES 13747 0% 100% 1
8 AFCOPAT CFJ 96 06 13747 0% 100% 1
9 AGR FOOD SCI PHYTOL 13747 0% 100% 1
10 AGR SCI N N212 13747 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PLANT MOLECULAR BIOLOGY 18031 4% 1% 94
2 JOURNAL OF BACTERIOLOGY 17254 9% 1% 205
3 MOLECULAR PLANT-MICROBE INTERACTIONS 12596 3% 2% 56
4 MOLECULAR & GENERAL GENETICS 11915 2% 2% 46
5 MOLECULAR AND GENERAL GENETICS 10917 3% 1% 62
6 PLASMID 9743 2% 2% 38
7 VITIS 5354 1% 2% 23
8 PLANT CELL REPORTS 4668 2% 1% 43
9 PLANT PHYSIOLOGY 2335 3% 0% 61
10 PLANT JOURNAL 2142 2% 0% 34

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CROWN GALL 923177 4% 69% 98 Search CROWN+GALL Search CROWN+GALL
2 TI PLASMID 602640 2% 80% 55 Search TI+PLASMID Search TI+PLASMID
3 AGROBACTERIUM VITIS 453085 2% 80% 41 Search AGROBACTERIUM+VITIS Search AGROBACTERIUM+VITIS
4 AGROBACTERIUM 386882 7% 18% 160 Search AGROBACTERIUM Search AGROBACTERIUM
5 AGROBACTERIUM TUMEFACIENS 349468 8% 14% 188 Search AGROBACTERIUM+TUMEFACIENS Search AGROBACTERIUM+TUMEFACIENS
6 OPINES 179593 1% 47% 28 Search OPINES Search OPINES
7 T DNA INTEGRATION 177346 1% 56% 23 Search T+DNA+INTEGRATION Search T+DNA+INTEGRATION
8 T DNA 169053 2% 23% 54 Search T+DNA Search T+DNA
9 VIRE2 165940 1% 93% 13 Search VIRE2 Search VIRE2
10 VIR GENES 147128 1% 63% 17 Search VIR+GENES Search VIR+GENES

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 GELVIN, SB , (2003) AGOBACTERIUM-MEDIATED PLANT TRANSFORMATION: THE BIOLOGY BEHIND THE "GENE-JOCKEYING" TOOL.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 67. ISSUE 1. P. 16-+ 219 62% 412
2 NESTER, EW , (2015) AGROBACTERIUM: NATURE'S GENETIC ENGINEER.FRONTIERS IN PLANT SCIENCE. VOL. 5. ISSUE . P. - 125 78% 7
3 GELVIN, SB , (2000) AGROBACTERIUM AND PLANT GENES INVOLVED IN T-DNA TRANSFER AND INTEGRATION.ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY. VOL. 51. ISSUE . P. 223 -256 152 69% 251
4 GELVIN, SB , (2009) AGROBACTERIUM IN THE GENOMICS AGE.PLANT PHYSIOLOGY. VOL. 150. ISSUE 4. P. 1665-1676 120 80% 46
5 WEISING, K , KAHL, G , (1996) NATURAL GENETIC ENGINEERING OF PLANT CELLS: THE MOLECULAR BIOLOGY OF CROWN GALL AND HAIRY ROOT DISEASE.WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY. VOL. 12. ISSUE 4. P. 327-351 211 72% 11
6 LACROIX, B , CITOVSKY, V , (2013) THE ROLES OF BACTERIAL AND HOST PLANT FACTORS IN AGROBACTERIUM-MEDIATED GENETIC TRANSFORMATION.INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY. VOL. 57. ISSUE 6-8. P. 467-481 118 69% 21
7 WINANS, SC , (1992) 2-WAY CHEMICAL SIGNALING IN AGROBACTERIUM-PLANT INTERACTIONS.MICROBIOLOGICAL REVIEWS. VOL. 56. ISSUE 1. P. 12-31 173 76% 226
8 GELVIN, SB , (2012) TRAVERSING THE CELL: AGROBACTERIUM T-DNA'S JOURNEY TO THE HOST GENOME.FRONTIERS IN PLANT SCIENCE. VOL. 3. ISSUE . P. - 86 83% 30
9 KADO, CI , (1991) MOLECULAR MECHANISMS OF CROWN GALL TUMORIGENESIS.CRITICAL REVIEWS IN PLANT SCIENCES. VOL. 10. ISSUE 1. P. 1-32 178 72% 108
10 PITZSCHKE, A , HIRT, H , (2010) NEW INSIGHTS INTO AN OLD STORY: AGROBACTERIUM-INDUCED TUMOUR FORMATION IN PLANTS BY PLANT TRANSFORMATION.EMBO JOURNAL. VOL. 29. ISSUE 6. P. 1021 -1032 84 72% 103

Classes with closest relation at Level 1


Rank Class id link
1 15145 MARKER FREE//MARKER FREE TRANSGENIC PLANTS//SITE SPECIFIC RECOMBINATION
2 9253 BACTERIAL CONJUGATION//RELAXASE//COUPLING PROTEIN
3 4692 AGROBACTERIUM RHIZOGENES//HAIRY ROOTS//TROPANE ALKALOIDS
4 851 IMMATURE EMBRYOS//PARTICLE BOMBARDMENT//MICROPROJECTILE BOMBARDMENT
5 29237 PARACOCCUS AMINOPHILUS JCM 7686//PROGRAMA EVOLUC MOL//BACTERIAL GENET
6 19124 TRANSGENIC RADISH//ETHYLENE INHIBITORS//AGNO3
7 23386 ALGINATE EMBEDDING//PLANT CANCER//BETA VULGARIS
8 7239 TRANSPOSON TAGGING//AC DS//GENE TAGGING
9 7049 COTYLEDONARY NODE//IMMATURE COTYLEDON//PLANT CELL REPORTS
10 26755 GOSSYPIUM HIRSUTUM L//GOSSYPIUM KLOTZSCHIANUM ANDERSS//BIOL AMELIORAT PROD VEGETALES

Go to start page