Class information for:
Level 1: MYOGLOBIN//WM KECK COMPUTAT BIOL//LIGAND MIGRATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
2055 2372 42.8 59%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
8 4 CARDIAC & CARDIOVASCULAR SYSTEM//PERIPHERAL VASCULAR DISEASES//CARDIOL 1276458
519 3       BLOOD SUBSTITUTES//NEUROGLOBIN//HEMOGLOBIN 20769
1479 2             NEUROGLOBIN//CYTOGLOBIN//HEMOGLOBIN 7662
2055 1                   MYOGLOBIN//WM KECK COMPUTAT BIOL//LIGAND MIGRATION 2372

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MYOGLOBIN authKW 109122 5% 7% 130
2 WM KECK COMPUTAT BIOL address 106591 1% 31% 27
3 LIGAND MIGRATION authKW 94128 1% 46% 16
4 TEMPERATURE DERIVATIVE SPECTROSCOPY authKW 70075 0% 78% 7
5 CO O 2 DISCRIMINATION authKW 64357 0% 100% 5
6 HEME PROTEINS authKW 63003 2% 9% 53
7 HEME ELECTRONIC STRUCTURE authKW 58834 0% 57% 8
8 DIPOLAR SHIFT authKW 57331 0% 64% 7
9 RANDOM ACCELERATION MOLECULAR DYNAMICS RAMD authKW 53629 0% 83% 5
10 ELECTRON PAIR REPULSION authKW 51486 0% 100% 4

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biophysics 6339 19% 0% 459
2 Biochemistry & Molecular Biology 6005 43% 0% 1017
3 Chemistry, Multidisciplinary 2040 21% 0% 500
4 Chemistry, Physical 1371 19% 0% 439
5 Physics, Atomic, Molecular & Chemical 1216 10% 0% 239
6 Chemistry, Inorganic & Nuclear 747 7% 0% 173
7 Spectroscopy 151 3% 0% 68
8 Biochemical Research Methods 18 2% 0% 46
9 Biology 16 1% 0% 35
10 Multidisciplinary Sciences 3 0% 0% 11

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 WM KECK COMPUTAT BIOL 106591 1% 31% 27
2 INTERDISCIPLINARY COMPLEX SYST 49368 2% 10% 39
3 21 CENTRUY COE PROGRAM 12871 0% 100% 1
4 ABT PHYS E17 12871 0% 100% 1
5 ACIDES NUCLEI BIOPHOTON 12871 0% 100% 1
6 BIOCHEM SCI CNR BIOL MOLEC 12871 0% 100% 1
7 BIOL STRUCTUNITE MIXTE RECH 9015 12871 0% 100% 1
8 BIOMED SCICNRSMEN 12871 0% 100% 1
9 CARACTERIZAC MAGNETICAS MAGNETOTER IA 12871 0% 100% 1
10 CEA DSM IRAMIS LIDYL 12871 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOCHEMISTRY 12244 10% 0% 227
2 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 9558 11% 0% 265
3 BIOPHYSICAL JOURNAL 9211 5% 1% 119
4 BIOPHYSICS OF STRUCTURE AND MECHANISM 4487 0% 6% 6
5 JOURNAL OF PHYSICAL CHEMISTRY B 3277 4% 0% 101
6 BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY 2849 1% 1% 22
7 BIOCHIMICA ET BIOPHYSICA ACTA 2545 3% 0% 77
8 BIOSPECTROSCOPY 2294 0% 3% 6
9 JOURNAL OF INORGANIC BIOCHEMISTRY 2009 1% 1% 30
10 INORGANIC BIOCHEMISTRY 1607 0% 13% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 MYOGLOBIN 109122 5% 7% 130 Search MYOGLOBIN Search MYOGLOBIN
2 LIGAND MIGRATION 94128 1% 46% 16 Search LIGAND+MIGRATION Search LIGAND+MIGRATION
3 TEMPERATURE DERIVATIVE SPECTROSCOPY 70075 0% 78% 7 Search TEMPERATURE+DERIVATIVE+SPECTROSCOPY Search TEMPERATURE+DERIVATIVE+SPECTROSCOPY
4 CO O 2 DISCRIMINATION 64357 0% 100% 5 Search CO+O+2+DISCRIMINATION Search CO+O+2+DISCRIMINATION
5 HEME PROTEINS 63003 2% 9% 53 Search HEME+PROTEINS Search HEME+PROTEINS
6 HEME ELECTRONIC STRUCTURE 58834 0% 57% 8 Search HEME+ELECTRONIC+STRUCTURE Search HEME+ELECTRONIC+STRUCTURE
7 DIPOLAR SHIFT 57331 0% 64% 7 Search DIPOLAR+SHIFT Search DIPOLAR+SHIFT
8 RANDOM ACCELERATION MOLECULAR DYNAMICS RAMD 53629 0% 83% 5 Search RANDOM+ACCELERATION+MOLECULAR+DYNAMICS+RAMD Search RANDOM+ACCELERATION+MOLECULAR+DYNAMICS+RAMD
9 ELECTRON PAIR REPULSION 51486 0% 100% 4 Search ELECTRON+PAIR+REPULSION Search ELECTRON+PAIR+REPULSION
10 GAS PERMEATION OF PROTEINS 51486 0% 100% 4 Search GAS+PERMEATION+OF+PROTEINS Search GAS+PERMEATION+OF+PROTEINS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 MOMENTEAU, M , REED, CA , (1994) SYNTHETIC HEME DIOXYGEN COMPLEXES.CHEMICAL REVIEWS. VOL. 94. ISSUE 3. P. 659-698 104 55% 514
2 KIM, S , LIM, M , (2012) PROTEIN CONFORMATION-CONTROLLED REBINDING BARRIER OF NO AND ITS BINDING TRAJECTORIES IN MYOGLOBIN AND HEMOGLOBIN AT ROOM TEMPERATURE.JOURNAL OF PHYSICAL CHEMISTRY B. VOL. 116. ISSUE 20. P. 5819-5830 68 81% 3
3 NIENHAUS, K , PALLADINO, P , NIENHAUS, GU , (2008) STRUCTURAL DYNAMICS OF MYOGLOBIN: FTIR-TDS STUDY OF NO MIGRATION AND BINDING.BIOCHEMISTRY. VOL. 47. ISSUE 3. P. 935-948 71 81% 27
4 SPRINGER, BA , SLIGAR, SG , OLSON, JS , PHILLIPS, GN , (1994) MECHANISMS OF LIGAND RECOGNITION IN MYOGLOBIN.CHEMICAL REVIEWS. VOL. 94. ISSUE 3. P. 699-714 65 78% 580
5 IONASCU, D , GRUIA, F , YE, X , YU, AC , ROSCA, F , BECK, C , DEMIDOV, A , OLSON, JS , CHAMPION, PM , (2005) TEMPERATURE-DEPENDENT STUDIES OF NO RECOMBINATION TO HEME AND HEME PROTEINS.JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. VOL. 127. ISSUE 48. P. 16921-16934 79 70% 61
6 ANSELMI, M , DI NOLA, A , AMADEI, A , (2011) THE EFFECTS OF THE L29F MUTATION ON THE LIGAND MIGRATION KINETICS IN CRYSTALLIZED MYOGLOBIN AS REVEALED BY MOLECULAR DYNAMICS SIMULATIONS.PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. VOL. 79. ISSUE 3. P. 867-879 57 89% 2
7 KIM, S , PARK, J , LEE, T , LIM, M , (2012) DIRECT OBSERVATION OF LIGAND REBINDING PATHWAYS IN HEMOGLOBIN USING FEMTOSECOND MID-IR SPECTROSCOPY.JOURNAL OF PHYSICAL CHEMISTRY B. VOL. 116. ISSUE 22. P. 6346-6355 52 95% 3
8 DANTSKER, D , ROCHE, C , SAMUNI, U , BLOUIN, G , OLSON, JS , FRIEDMAN, JM , (2005) THE POSITION 68(E11) SIDE CHAIN IN MYOGLOBIN REGULATES LIGAND CAPTURE, BOND FORMATION WITH HEME IRON, AND INTERNAL MOVEMENT INTO THE XENON CAVITIES.JOURNAL OF BIOLOGICAL CHEMISTRY. VOL. 280. ISSUE 46. P. 38740-38755 63 90% 31
9 NIENHAUS, K , DENG, PC , OLSON, JS , WARREN, JJ , NIENHAUS, GU , (2003) STRUCTURAL DYNAMICS OF MYOGLOBIN - LIGAND MIGRATION AND BINDING IN VALINE 68 MUTANTS.JOURNAL OF BIOLOGICAL CHEMISTRY. VOL. 278. ISSUE 43. P. 42532-42544 62 91% 47
10 ABBRUZZETTI, S , SPYRAKIS, F , BIDON-CHANAL, A , LUQUE, FJ , VIAPPIANI, C , (2013) LIGAND MIGRATION THROUGH HEMEPROTEIN CAVITIES: INSIGHTS FROM LASER FLASH PHOTOLYSIS AND MOLECULAR DYNAMICS SIMULATIONS.PHYSICAL CHEMISTRY CHEMICAL PHYSICS. VOL. 15. ISSUE 26. P. 10686-10701 99 45% 5

Classes with closest relation at Level 1


Rank Class id link
1 8467 AHSP//RECOMBINANT MUTANT HEMOGLOBIN//5 5 DITHIOBIS2 NITROBENZOATE
2 19864 FIXL//COOA//GAS SENSOR PROTEINS
3 12706 EXTRACELLULAR HEMOGLOBIN//GLOSSOSCOLEX PAULISTUS//ERYTHROCRUORIN
4 27666 BINAPHTHYL PORPHYRIN//CHIRAL PORPHYRIN//CHIROPORPHYRIN
5 10102 CYTOCHROME C PEROXIDASE//RADIATION INDUCED INACTIVATION//RECOMBINANT HORSERADISH PEROXIDASE
6 3605 NONPLANAR PORPHYRINS//MAT THEORY COMPUTAT//NORMAL COORDINATE STRUCTURAL DECOMPOSITION
7 7224 NEUROGLOBIN//CYTOGLOBIN//VITREOSCILLA HEMOGLOBIN
8 31038 FERRI AND FERROCYANIDE//ACQUIRED DNA BINDING ACTIVITY//BIOLOGY B022
9 8052 COMPOUND I//LISE MEITNER MINERVA COMPUTAT QUANTUM CHEM//MULTIPLE OXIDANTS
10 10231 DINITROSYL IRON COMPLEXES//SULFUR NITROSYL IRON COMPLEXES//IRON SULFUR NITROSYL COMPLEXES

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