Class information for:
Level 1: AUTOPHAGY//XENOPHAGY//LC3 ASSOCIATED PHAGOCYTOSIS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
10327 1073 57.8 95%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
262 3       AUTOPHAGY//RESVERATROL//HISTONE DEACETYLASE INHIBITOR 44558
1128 2             AUTOPHAGY//BECLIN 1//LC3 9655
10327 1                   AUTOPHAGY//XENOPHAGY//LC3 ASSOCIATED PHAGOCYTOSIS 1073

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 AUTOPHAGY authKW 497652 41% 4% 435
2 XENOPHAGY authKW 342411 2% 63% 19
3 LC3 ASSOCIATED PHAGOCYTOSIS authKW 182118 1% 80% 8
4 ATG5 authKW 132750 3% 17% 28
5 BONE PATHOPHYSIOL PROGRAM BONETWORK address 85369 0% 100% 3
6 AUTOPHAGOSOME authKW 79013 3% 8% 34
7 LC3 authKW 66460 3% 7% 35
8 VIRAL IMMUNOBIOL address 64440 1% 14% 16
9 VIROPHAGY authKW 64025 0% 75% 3
10 AUTOPHAGIC RECEPTORS authKW 56913 0% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Virology 4695 16% 0% 174
2 Cell Biology 4477 34% 0% 361
3 Immunology 3653 29% 0% 309
4 Microbiology 1413 16% 0% 174
5 Parasitiology 913 6% 0% 63
6 Biochemistry & Molecular Biology 294 18% 0% 191
7 Medicine, Research & Experimental 132 5% 0% 57
8 Gastroenterology & Hepatology 70 3% 0% 35
9 Infectious Diseases 68 3% 0% 34
10 Multidisciplinary Sciences 8 1% 0% 8

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BONE PATHOPHYSIOL PROGRAM BONETWORK 85369 0% 100% 3
2 VIRAL IMMUNOBIOL 64440 1% 14% 16
3 HOST PATHOGEN DYNAM 42682 0% 50% 3
4 STUDY INFLAMMATORY BOWEL DIS 41056 2% 8% 19
5 COMPUTAT INTEGRAT BIOLRICHARD B SIMCHES RE 37940 0% 67% 2
6 COMPUTAT INTEGRAT BIOL 30880 2% 5% 24
7 AUTOPHAGY INFECT IMMUN 28456 0% 100% 1
8 BIOL CELULAR MOL UNIV 28456 0% 100% 1
9 BIOLUM1 28456 0% 100% 1
10 BRC TRANSLAT IMMUNOL HLTH 28456 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 AUTOPHAGY 235252 10% 7% 112
2 CELL HOST & MICROBE 30678 3% 3% 34
3 CELLULAR MICROBIOLOGY 6415 2% 1% 23
4 FRONTIERS IN IMMUNOLOGY 5151 2% 1% 23
5 IMMUNITY 3291 2% 1% 20
6 FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 2287 1% 1% 8
7 VIRUSES-BASEL 2085 1% 1% 11
8 PLOS PATHOGENS 2042 2% 0% 20
9 JOURNAL OF VIROLOGY 1324 4% 0% 44
10 CURRENT OPINION IN IMMUNOLOGY 1232 1% 0% 11

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 AUTOPHAGY 497652 41% 4% 435 Search AUTOPHAGY Search AUTOPHAGY
2 XENOPHAGY 342411 2% 63% 19 Search XENOPHAGY Search XENOPHAGY
3 LC3 ASSOCIATED PHAGOCYTOSIS 182118 1% 80% 8 Search LC3+ASSOCIATED+PHAGOCYTOSIS Search LC3+ASSOCIATED+PHAGOCYTOSIS
4 ATG5 132750 3% 17% 28 Search ATG5 Search ATG5
5 AUTOPHAGOSOME 79013 3% 8% 34 Search AUTOPHAGOSOME Search AUTOPHAGOSOME
6 LC3 66460 3% 7% 35 Search LC3 Search LC3
7 VIROPHAGY 64025 0% 75% 3 Search VIROPHAGY Search VIROPHAGY
8 AUTOPHAGIC RECEPTORS 56913 0% 100% 2 Search AUTOPHAGIC+RECEPTORS Search AUTOPHAGIC+RECEPTORS
9 CELL DIFFERENTIATION AND DEVELOPMENT 56913 0% 100% 2 Search CELL+DIFFERENTIATION+AND+DEVELOPMENT Search CELL+DIFFERENTIATION+AND+DEVELOPMENT
10 NDP52 47421 0% 33% 5 Search NDP52 Search NDP52

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 SHIBUTANI, ST , SAITOH, T , NOWAG, H , MUNZ, C , YOSHIMORI, T , (2015) AUTOPHAGY AND AUTOPHAGY-RELATED PROTEINS IN THE IMMUNE SYSTEM.NATURE IMMUNOLOGY. VOL. 16. ISSUE 10. P. 1014 -1024 102 62% 35
2 DERETIC, V , SAITOH, T , AKIRA, S , (2013) AUTOPHAGY IN INFECTION, INFLAMMATION AND IMMUNITY.NATURE REVIEWS IMMUNOLOGY. VOL. 13. ISSUE 10. P. 722-737 81 54% 312
3 MUNZ, C , (2017) THE MACROAUTOPHAGY MACHINERY IN ENDO- AND EXOCYTOSIS.JOURNAL OF MOLECULAR BIOLOGY. VOL. 429. ISSUE 4. P. 473 -485 70 68% 1
4 CADWELL, K , (2016) CROSSTALK BETWEEN AUTOPHAGY AND INFLAMMATORY SIGNALLING PATHWAYS: BALANCING DEFENCE AND HOMEOSTASIS.NATURE REVIEWS IMMUNOLOGY. VOL. 16. ISSUE 11. P. 661 -675 97 57% 1
5 DERETIC, V , KIMURA, T , TIMMINS, G , MOSELEY, P , CHAUHAN, S , MANDELL, M , (2015) IMMUNOLOGIC MANIFESTATIONS OF AUTOPHAGY.JOURNAL OF CLINICAL INVESTIGATION. VOL. 125. ISSUE 1. P. 75 -84 77 52% 25
6 LEVINE, B , MIZUSHIMA, N , VIRGIN, HW , (2011) AUTOPHAGY IN IMMUNITY AND INFLAMMATION.NATURE. VOL. 469. ISSUE 7330. P. 323 -335 44 46% 970
7 PAUL, P , MUNZ, C , (2016) AUTOPHAGY AND MAMMALIAN VIRUSES: ROLES IN IMMUNE RESPONSE, VIRAL REPLICATION, AND BEYOND.ADVANCES IN VIRUS RESEARCH, VOL 95. VOL. 95. ISSUE . P. 149 -195 95 44% 3
8 DONG, XN , LEVINE, B , (2013) AUTOPHAGY AND VIRUSES: ADVERSARIES OR ALLIES?.JOURNAL OF INNATE IMMUNITY. VOL. 5. ISSUE 5. P. 480 -493 62 71% 38
9 RANDOW, F , MUNZ, C , (2012) AUTOPHAGY IN THE REGULATION OF PATHOGEN REPLICATION AND ADAPTIVE IMMUNITY.TRENDS IN IMMUNOLOGY. VOL. 33. ISSUE 10. P. 475 -487 76 59% 39
10 GOMES, LC , DIKIC, I , (2014) AUTOPHAGY IN ANTIMICROBIAL IMMUNITY.MOLECULAR CELL. VOL. 54. ISSUE 2. P. 224-233 57 58% 59

Classes with closest relation at Level 1


Rank Class id link
1 59 AUTOPHAGY//BECLIN 1//LC3
2 26463 GUANYLATE BINDING PROTEIN//P47 GTPASES//MOL EXPT SURG
3 28679 GERIATR MED NEPHROL B6//AUTOPHAGY//ADENOVIRAL BCL XL
4 36006 NANO EU2O3//ANTI MIGRATION AND ANTI INVASION//AUTOPHAGY MODULATING EFFECT
5 18799 THIOL REDUCTASE ACTIVITY//CROSS PRESENTATION//INTERFERON GAMMA INDUCIBLE LYSOSOMAL THIOL REDUCTASE
6 5671 CROHNS DISEASE//CARD15//ATG16L1
7 16746 T CELL METABOLISM//IMMUNOMETABOLISM//VANDERBILT IMMUNOBIOL
8 26015 420//CENT INVESTGRP INMUNOL CELULAR INMUNOGENET//ANIM TSE ANIM EPIDEMIOL ZOONOS
9 19319 DANON DISEASE//LAMP 2//LAMP 2 DEFICIENCY
10 32996 ENTOSIS//CELL CANNIBALISM//CELL IN CELL

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