Till KTH:s startsida Till KTH:s startsida

Ändringar mellan två versioner

Här visas ändringar i "Lab 3" mellan 2016-10-27 09:46 av Lars Arvestad och 2016-11-25 14:26 av Lars Arvestad.

Lab 3

These assignments are meant to introduce you to both the pattern library "re" and "Biopython".

Notice! The online documentation that you find at BioPython.org is for recent version 1.49, which was released late in the couand contains differences compared to what you find on the school computerse. CSC has version 1.48 installed, and there are someyou changes which become apparent in this lab. The BioPython tutorial we link to is for the version you need find documentation for it here!!

There is an advanced assignment for Lab 3 on plotting.

Basic assignments
* Translate DNA
* Motif filter
* KLEEK aligned?
* Remote Blast
* Blast parsing.