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Här visas ändringar i "KLEEK aligned?" mellan 2015-11-02 11:18 av Lars Arvestad och 2015-12-07 16:30 av Lars Arvestad.
KLEEK aligned?
Science: Does the KLEEK motif line up? Note: This assignment is connected to the motif filter assignment.
Determine whether the sequences are conserved enough around the KLEEK motif that its alignment is perfect: the motif sequences are lining up.
* Take the test file and retrieve the sequences that contain the KLEEK motif.
* Use the program muscle to compute a multialignment of the KLEEK sequences.
* Use the alignment viewer seaview to inspect the alignment. How well does the KLEEK motifs align?
To present:
* Explain the purpose of multialignment!
* Does the KLEEK motif line up in your multialignment?