Publications by Wei Ouyang
Peer reviewed
Articles
[1]
W. Lei et al., "BioImage.IO Chatbot : a community-driven AI assistant for integrative computational bioimaging," Nature Methods, vol. 21, no. 8, 2024.
[2]
E. Li et al., "ESPressoscope : A small and powerful approach for in situ microscopy," PLOS ONE, vol. 19, no. 10, 2024.
[3]
M. R. King et al., "Macromolecular condensation organizes nucleolar sub-phases to set up a pH gradient," Cell, vol. 187, no. 8, pp. 24-1889, 2024.
[4]
G. T. Johnson et al., "Building the next generation of virtual cells to understand cellular biology," Biophysical Journal, vol. 122, no. 18, pp. 3560-3569, 2023.
[5]
W. Ouyang, K. W. Eliceiri and B. A. Cimini, "Moving beyond the desktop: prospects for practical bioimage analysis via the web," Frontiers in Bioinformatics, vol. 3, 2023.
[6]
J. Moore et al., "OME-Zarr : a cloud-optimized bioimaging file format with international community support," Histochemistry and Cell Biology, vol. 160, no. 3, pp. 223-251, 2023.
[7]
W. Ouyang et al., "An Open-Source Modular Framework for Automated Pipetting and Imaging Applications," Advanced Biology, vol. 6, no. 4, pp. 2101063, 2022.
[8]
T. Le et al., "Analysis of the Human Protein Atlas Weakly Supervised Single-Cell Classification competition," Nature Methods, vol. 19, no. 10, pp. 1221-1229, 2022.
[9]
A. Imbert et al., "FISH-quant v2 : a scalable and modular tool for smFISH image analysis," RNA : A publication of the RNA Society, vol. 28, no. 6, pp. 786-795, 2022.
[10]
W. Ouyang et al., "ShareLoc — an open platform for sharing localization microscopy data," Nature Methods, vol. 19, no. 11, pp. 1331-1333, 2022.
[11]
Y. Qin et al., "A multi-scale map of cell structure fusing protein images and interactions," Nature, vol. 600, no. 7889, pp. 536-+, 2021.
[12]
E. Gómez-de-Mariscal et al., "DeepImageJ : A user-friendly environment to run deep learning models in ImageJ," Nature Methods, vol. 18, no. 10, pp. 1192-1195, 2021.
[13]
W. Ouyang et al., "Interactive biomedical segmentation tool powered by deep learning and ImJoy," F1000 Research, vol. 10, 2021.
[14]
H. Pinkard et al., "Pycro-Manager : open-source software for customized and reproducible microscope control," Nature Methods, vol. 18, no. 3, pp. 226-+, 2021.
[15]
W. Ouyang et al., "Analysis of the Human Protein Atlas Image Classification competition (vol 16, pg 1254, 2019)," Nature Methods, vol. 17, no. 1, pp. 115-115, 2020.
[16]
W. Ouyang et al., "Analysis of the Human Protein Atlas Image Classification competition (vol 54, pg 2112, 2019)," Nature Methods, vol. 17, no. 2, pp. 241-241, 2020.
[17]
L. Stenström et al., "Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder," Molecular Systems Biology, vol. 16, no. 8, 2020.
[18]
W. Ouyang et al., "Analysis of the Human Protein Atlas Image Classification competition," Nature Methods, vol. 16, no. 12, pp. 1254-+, 2019.
[19]
W. Ouyang et al., "ImJoy : an open-source computational platform for the deep learning era," Nature Methods, vol. 16, no. 12, pp. 1199-1200, 2019.
Non-peer reviewed
Articles
[20]
C. García López de Haro et al., "JDLL: a library to run deep learning models on Java bioimage informatics platforms," Nature Methods, vol. 21, no. 1, pp. 7-8, 2024.
[21]
Y. Zhang et al., "ISG15 modification of the Arp2/3 complex restricts pathogen spread," Molecular Biology of the Cell, vol. 34, no. 2, pp. 818-818, 2023.
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2024-11-17 03:35:35