Class information for:
Level 2: CHROMOSOME TERRITORY//NUCLEAR ARCHITECTURE//NUCLEAR ORGANIZATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
3084 2372 51.7 84%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
71 3       GENETICS & HEREDITY//CHROMATIN//CELL BIOLOGY 83302
3084 2             CHROMOSOME TERRITORY//NUCLEAR ARCHITECTURE//NUCLEAR ORGANIZATION 2372
3065 1                   CHROMOSOME TERRITORY//NUCLEAR ARCHITECTURE//NUCLEAR ORGANIZATION 2075
27340 1                   GENOME THEORY//GENOME CHAOS//GENOM CANC DIAG 232
37159 1                   GRP ONCOGENET//INTESTINE DIFFUSE POLYPOSIS//INTESTINE MALIGNANT POLYPOSIS 65

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CHROMOSOME TERRITORY authKW 1030068 4% 78% 102
2 NUCLEAR ARCHITECTURE authKW 535114 4% 45% 93
3 NUCLEAR ORGANIZATION authKW 390313 4% 33% 91
4 CHROMOSOME CONFORMATION CAPTURE authKW 267218 1% 59% 35
5 HI C authKW 212203 1% 63% 26
6 3D FISH authKW 208514 1% 90% 18
7 GENOME THEORY authKW 168185 1% 93% 14
8 NUCL DYNAM PROGRAMME address 165938 1% 68% 19
9 GENE POSITIONING authKW 148395 1% 82% 14
10 TRANSCRIPTION FACTORY authKW 141888 1% 53% 21

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Cell Biology 17508 44% 0% 1043
2 Genetics & Heredity 15446 34% 0% 804
3 Biochemistry & Molecular Biology 2998 32% 0% 757
4 Biochemical Research Methods 856 7% 0% 171
5 Biotechnology & Applied Microbiology 812 9% 0% 218
6 Mathematical & Computational Biology 781 4% 0% 86
7 Developmental Biology 502 3% 0% 78
8 Oncology 345 8% 0% 198
9 Microscopy 179 1% 0% 25
10 Biophysics 136 4% 0% 92

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NUCL DYNAM PROGRAMME 165938 1% 68% 19
2 PROGRAM SYST BIOL 94540 1% 28% 26
3 NUCL GENOM HLTH 65154 0% 56% 9
4 GENOME FUNCT GRP 63066 0% 70% 7
5 MANITOBA CELL BIOL 61740 2% 11% 43
6 CHROMATIN GENE EXP S 57901 1% 30% 15
7 GRP REGULAT SPATIALE GENOMES 57331 0% 64% 7
8 GENOM CANC DIAG 52553 0% 58% 7
9 HOWARD HUGHES MED PROGRAM SYST BIOL 51486 0% 100% 4
10 RG DEV DIS 51486 0% 100% 4

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NUCLEUS 40491 1% 11% 29
2 CHROMOSOME RESEARCH 35039 3% 4% 67
3 CHROMOSOMA 27834 3% 3% 76
4 CURRENT OPINION IN GENETICS & DEVELOPMENT 16388 2% 3% 50
5 NUCLEUS-AUSTIN 15264 1% 8% 14
6 CURRENT OPINION IN CELL BIOLOGY 10285 2% 2% 46
7 GENOME BIOLOGY 9867 2% 2% 48
8 JOURNAL OF CELL SCIENCE 5897 3% 1% 78
9 EPIGENETICS & CHROMATIN 5368 0% 4% 11
10 GENOME RESEARCH 5349 1% 2% 24

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CHROMOSOME TERRITORY 1030068 4% 78% 102 Search CHROMOSOME+TERRITORY Search CHROMOSOME+TERRITORY
2 NUCLEAR ARCHITECTURE 535114 4% 45% 93 Search NUCLEAR+ARCHITECTURE Search NUCLEAR+ARCHITECTURE
3 NUCLEAR ORGANIZATION 390313 4% 33% 91 Search NUCLEAR+ORGANIZATION Search NUCLEAR+ORGANIZATION
4 CHROMOSOME CONFORMATION CAPTURE 267218 1% 59% 35 Search CHROMOSOME+CONFORMATION+CAPTURE Search CHROMOSOME+CONFORMATION+CAPTURE
5 HI C 212203 1% 63% 26 Search HI+C Search HI+C
6 3D FISH 208514 1% 90% 18 Search 3D+FISH Search 3D+FISH
7 GENOME THEORY 168185 1% 93% 14 Search GENOME+THEORY Search GENOME+THEORY
8 GENE POSITIONING 148395 1% 82% 14 Search GENE+POSITIONING Search GENE+POSITIONING
9 TRANSCRIPTION FACTORY 141888 1% 53% 21 Search TRANSCRIPTION+FACTORY Search TRANSCRIPTION+FACTORY
10 INTERPHASE CHROMOSOMES 131630 1% 68% 15 Search INTERPHASE+CHROMOSOMES Search INTERPHASE+CHROMOSOMES

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 DENKER, A , DE LAAT, W , (2016) THE SECOND DECADE OF 3C TECHNOLOGIES: DETAILED INSIGHTS INTO NUCLEAR ORGANIZATION.GENES & DEVELOPMENT. VOL. 30. ISSUE 12. P. 1357 -1382 133 67% 8
2 CREMER, T , CREMER, M , (2010) CHROMOSOME TERRITORIES.COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. VOL. 2. ISSUE 3. P. - 106 80% 288
3 FRASER, J , WILLIAMSON, I , BICKMORE, WA , DOSTIE, J , (2015) AN OVERVIEW OF GENOME ORGANIZATION AND HOW WE GOT THERE: FROM FISH TO HI-C.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 79. ISSUE 3. P. 347 -372 161 55% 17
4 DEKKER, J , MARTI-RENOM, MA , MIRNY, LA , (2013) EXPLORING THE THREE-DIMENSIONAL ORGANIZATION OF GENOMES: INTERPRETING CHROMATIN INTERACTION DATA.NATURE REVIEWS GENETICS. VOL. 14. ISSUE 6. P. 390 -403 72 69% 246
5 SCHMITT, AD , HU, M , REN, B , (2016) GENOME-WIDE MAPPING AND ANALYSIS OF CHROMOSOME ARCHITECTURE.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 17. ISSUE 12. P. 743 -755 92 83% 3
6 SOLOVEI, I , THANISCH, K , FEODOROVA, Y , (2016) HOW TO RULE THE NUCLEUS: DIVIDE ET IMPERA.CURRENT OPINION IN CELL BIOLOGY. VOL. 40. ISSUE . P. 47 -59 84 78% 4
7 DEKKER, J , MIRNY, L , (2016) THE 3D GENOME AS MODERATOR OF CHROMOSOMAL COMMUNICATION.CELL. VOL. 164. ISSUE 6. P. 1110 -1121 61 57% 28
8 ROUQUETTE, J , CREMER, C , CREMER, T , FAKAN, S , (2010) FUNCTIONAL NUCLEAR ARCHITECTURE STUDIED BY MICROSCOPY: PRESENT AND FUTURE.INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY, VOL 282. VOL. 282. ISSUE . P. 1-90 192 45% 33
9 AY, F , NOBLE, WS , (2015) ANALYSIS METHODS FOR STUDYING THE 3D ARCHITECTURE OF THE GENOME.GENOME BIOLOGY. VOL. 16. ISSUE . P. - 88 80% 10
10 PUESCHEL, R , CORAGGIO, F , MEISTER, P , (2016) FROM SINGLE GENES TO ENTIRE GENOMES: THE SEARCH FOR A FUNCTION OF NUCLEAR ORGANIZATION.DEVELOPMENT. VOL. 143. ISSUE 6. P. 910 -923 94 78% 1

Classes with closest relation at Level 2


Rank Class id link
1 3263 CTCF//CONTROL GENET PROC//NF Y
2 2436 LAMIN//LAMINOPATHY//NUCLEAR ENVELOPE
3 2682 DNA REPLICATION//GEMININ//CDC6
4 1094 NUCLEAR MATRIX//LINKER HISTONE//HISTONE H1
5 1020 NUCLEOLUS//RIBOSOME BIOGENESIS//SNORNA
6 343 EZH2//CHROMATIN//POLYCOMB
7 2573 MEIOSIS//SYNAPTONEMAL COMPLEX//CYTOMIXIS
8 1227 TRANSPOSABLE ELEMENTS//RETROTRANSPOSON//CHROMOSOMA
9 540 KINETOCHORE//MITOSIS//CENTROSOME
10 1278 NANOBIOPHOTON//SUPER RESOLUTION MICROSCOPY//HIGH CONTENT SCREENING

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