Class information for:
Level 1: PORE FORMING TOXIN//CHOLESTEROL DEPENDENT CYTOLYSIN//GAMMA HEMOLYSIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
9755 1123 40.0 74%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
388 3       TOXICON//ANTIMICROBIAL PEPTIDE//SNAKE VENOM 30875
2831 2             ACTINOPORIN//PORE FORMING TOXIN//SEA ANEMONE 2985
9755 1                   PORE FORMING TOXIN//CHOLESTEROL DEPENDENT CYTOLYSIN//GAMMA HEMOLYSIN 1123

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PORE FORMING TOXIN authKW 810743 8% 35% 86
2 CHOLESTEROL DEPENDENT CYTOLYSIN authKW 497070 3% 63% 29
3 GAMMA HEMOLYSIN authKW 409437 1% 94% 16
4 LEUKOCIDIN authKW 408964 2% 79% 19
5 ALPHA TOXIN authKW 345118 5% 23% 56
6 STAPHYLOCOCCAL LEUKOCIDIN authKW 326272 1% 100% 12
7 PERFRINGOLYSIN O authKW 257782 1% 59% 16
8 VIBRIO CHOLERAE CYTOLYSIN authKW 226574 1% 83% 10
9 AEROLYSIN authKW 217482 2% 33% 24
10 THIOL ACTIVATED TOXIN authKW 190325 1% 100% 7

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 3463 47% 0% 525
2 Microbiology 2562 21% 0% 234
3 Infectious Diseases 1732 12% 0% 138
4 Immunology 1658 20% 0% 221
5 Biophysics 1613 15% 0% 163
6 Cell Biology 872 16% 0% 178
7 Toxicology 179 5% 0% 51
8 Virology 105 3% 0% 32
9 Parasitiology 100 2% 0% 24
10 Biochemical Research Methods 72 4% 0% 41

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DFG MEMBRANE CYTOSKELETON INTERACT GRP 113287 0% 83% 5
2 TOXINOL ANTIBIOL BACTERIENNES 87004 0% 80% 4
3 AGR PL BIOL CHEM AOBA KU 86996 1% 40% 8
4 GRP BIOPHYS STRUCT 81568 0% 100% 3
5 CNR ITC 54379 0% 100% 2
6 MEDUP EA 3432 54379 0% 100% 2
7 RUDOLF VIRCHOW EXPT BIOMED SCI 54379 0% 100% 2
8 BIOTA STRUCT BIOL 51715 1% 14% 14
9 PROT SCI DESIGN ENGN 48932 1% 30% 6
10 CRYSTALLOG BIOL SCI 40781 0% 50% 3

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 INFECTION AND IMMUNITY 10581 9% 0% 102
2 TOXICON 4146 3% 0% 32
3 FEMS MICROBIOLOGY IMMUNOLOGY 3418 0% 3% 4
4 TOXINS 3206 1% 1% 13
5 CELLULAR MICROBIOLOGY 2596 1% 1% 15
6 BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 1889 2% 0% 21
7 MOLECULAR MICROBIOLOGY 1506 2% 0% 26
8 BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 1373 2% 0% 25
9 MICROBIAL PATHOGENESIS 1341 1% 0% 12
10 JAPANESE JOURNAL OF MEDICAL SCIENCE & BIOLOGY 1300 0% 1% 5

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PORE FORMING TOXIN 810743 8% 35% 86 Search PORE+FORMING+TOXIN Search PORE+FORMING+TOXIN
2 CHOLESTEROL DEPENDENT CYTOLYSIN 497070 3% 63% 29 Search CHOLESTEROL+DEPENDENT+CYTOLYSIN Search CHOLESTEROL+DEPENDENT+CYTOLYSIN
3 GAMMA HEMOLYSIN 409437 1% 94% 16 Search GAMMA+HEMOLYSIN Search GAMMA+HEMOLYSIN
4 LEUKOCIDIN 408964 2% 79% 19 Search LEUKOCIDIN Search LEUKOCIDIN
5 ALPHA TOXIN 345118 5% 23% 56 Search ALPHA+TOXIN Search ALPHA+TOXIN
6 STAPHYLOCOCCAL LEUKOCIDIN 326272 1% 100% 12 Search STAPHYLOCOCCAL+LEUKOCIDIN Search STAPHYLOCOCCAL+LEUKOCIDIN
7 PERFRINGOLYSIN O 257782 1% 59% 16 Search PERFRINGOLYSIN+O Search PERFRINGOLYSIN+O
8 VIBRIO CHOLERAE CYTOLYSIN 226574 1% 83% 10 Search VIBRIO+CHOLERAE+CYTOLYSIN Search VIBRIO+CHOLERAE+CYTOLYSIN
9 AEROLYSIN 217482 2% 33% 24 Search AEROLYSIN Search AEROLYSIN
10 THIOL ACTIVATED TOXIN 190325 1% 100% 7 Search THIOL+ACTIVATED+TOXIN Search THIOL+ACTIVATED+TOXIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 ALONZO, F , TORRES, VJ , (2014) THE BICOMPONENT PORE-FORMING LEUCOCIDINS OF STAPHYLOCOCCUS AUREUS.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 78. ISSUE 2. P. 199 -230 113 42% 37
2 DAL PERARO, M , VAN DER GOOT, FG , (2016) PORE-FORMING TOXINS: ANCIENT, BUT NEVER REALLY OUT OF FASHION.NATURE REVIEWS MICROBIOLOGY. VOL. 14. ISSUE 2. P. 77 -92 78 41% 12
3 PREVOST, G , MOUREY, L , COLIN, DA , MENESTRINA, G , (2001) STAPHYLOCOCCAL PORE-FORMING TOXINS.PORE-FORMING TOXINS. VOL. 257. ISSUE . P. 53 -83 94 75% 63
4 TWETEN, RK , HOTZE, EM , WADE, KR , (2015) THE UNIQUE MOLECULAR CHOREOGRAPHY OF GIANT PORE FORMATION BY THE CHOLESTEROL-DEPENDENT CYTOLYSINS OF GRAM-POSITIVE BACTERIA.ANNUAL REVIEW OF MICROBIOLOGY, VOL 69. VOL. 69. ISSUE . P. 323 -340 62 67% 8
5 BERUBE, BJ , WARDENBURG, JB , (2013) STAPHYLOCOCCUS AUREUS ALPHA-TOXIN: NEARLY A CENTURY OF INTRIGUE.TOXINS. VOL. 5. ISSUE 6. P. 1140-1166 63 47% 106
6 IACOVACHE, I , VAN DER GOOT, FG , PERNOT, L , (2008) PORE FORMATION: AN ANCIENT YET COMPLEX FORM OF ATTACK.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1778. ISSUE 7-8. P. 1611-1623 72 54% 82
7 YAMASHITA, K , KAWAI, Y , TANAKA, Y , HIRANO, N , KANEKO, J , TOMITA, N , OHTA, M , KAMIO, Y , YAO, M , TANAKA, I , (2011) CRYSTAL STRUCTURE OF THE OCTAMERIC PORE OF STAPHYLOCOCCAL GAMMA-HEMOLYSIN REVEALS THE BETA-BARREL PORE FORMATION MECHANISM BY TWO COMPONENTS.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 108. ISSUE 42. P. 17314 -17319 38 88% 60
8 REBOUL, CF , WHISSTOCK, JC , DUNSTONE, MA , (2016) GIANT MACPF/CDC PORE FORMING TOXINS: A CLASS OF THEIR OWN.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1858. ISSUE 3. P. 475 -486 58 50% 3
9 HOTZE, EM , TWETEN, RK , (2012) MEMBRANE ASSEMBLY OF THE CHOLESTEROL-DEPENDENT CYTOLYSIN PORE COMPLEX.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1818. ISSUE 4. P. 1028-1038 59 49% 54
10 TWETEN, RK , (2005) CHOLESTEROL-DEPENDENT CYTOLYSINS, A FAMILY OF VERSATILE PORE-FORMING TOXINS.INFECTION AND IMMUNITY. VOL. 73. ISSUE 10. P. 6199-6209 53 58% 228

Classes with closest relation at Level 1


Rank Class id link
1 34094 ASP HEMOLYSIN//AEGEROLYSIN//OSTREOLYSIN
2 16004 BETA ROLL//ESCHERICHIA COLI HEMOLYSIN//RTX TOXIN
3 16091 ACTINOPORIN//SEA ANEMONE//STICHOLYSIN
4 27177 CA2 DEPENDENT K TRANSPORT//EAC ROSETTES//HOMOLOGOUS CELLS
5 4763 MOYNE PREVENT MED//STAPHYLOCOCCUS AUREUS//CLUMPING FACTOR A
6 4317 STREPTOCOCCUS PNEUMONIAE//PNEUMOLYSIN//PSPA
7 23533 ARCANOBACTERIUM PYOGENES//ARCANOBACTERIUM HAEMOLYTICUM//TRUEPERELLA PYOGENES
8 2984 CLOSTRIDIUM PERFRINGENS//NECROTIC ENTERITIS//EPSILON TOXIN
9 3148 NANOPORE//SOLID STATE NANOPORE//ALPHA HEMOLYSIN
10 1617 LISTERIA MONOCYTOGENES//UNITE INTERACT BACTERIES CELLULES//LISTERIOLYSIN O

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