Class information for:
Level 1: CELL SEGMENTATION//HISTOPATHOLOGICAL IMAGE ANALYSIS//NUCLEI SEGMENTATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
6978 1420 31.7 62%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
10 4 OPTICS//PHYSICS, PARTICLES & FIELDS//PHYSICS, MULTIDISCIPLINARY 1131262
359 3       JOURNAL OF BIOMEDICAL OPTICS//BIOMEDICAL OPTICS EXPRESS//OPTICS 34746
1278 2             NANOBIOPHOTON//SUPER RESOLUTION MICROSCOPY//HIGH CONTENT SCREENING 8720
6978 1                   CELL SEGMENTATION//HISTOPATHOLOGICAL IMAGE ANALYSIS//NUCLEI SEGMENTATION 1420

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CELL SEGMENTATION authKW 563962 3% 66% 40
2 HISTOPATHOLOGICAL IMAGE ANALYSIS authKW 494548 2% 100% 23
3 NUCLEI SEGMENTATION authKW 250198 1% 73% 16
4 TISSUE COUNTER ANALYSIS authKW 165396 1% 77% 10
5 NUCLEAR SEGMENTATION authKW 145135 1% 75% 9
6 ANALYT MORPHOL DERMATOL address 144533 1% 61% 11
7 CLUMP SPLITTING authKW 137610 1% 80% 8
8 MITOSIS DETECTION authKW 110581 0% 86% 6
9 DIGITAL PATHOLOGY authKW 110216 2% 18% 29
10 BREAST CANCER GRADING authKW 107511 0% 100% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Engineering, Biomedical 9969 21% 0% 302
2 Microscopy 8476 8% 0% 120
3 Computer Science, Artificial Intelligence 7599 19% 0% 276
4 Mathematical & Computational Biology 4695 11% 0% 153
5 Imaging Science & Photographic Technology 4101 8% 0% 110
6 Computer Science, Interdisciplinary Applications 4029 15% 0% 210
7 Medical Informatics 3368 6% 0% 87
8 Biochemical Research Methods 2873 16% 0% 222
9 Radiology, Nuclear Medicine & Medical Imaging 1384 13% 0% 186
10 Cell Biology 1172 16% 0% 231

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ANALYT MORPHOL DERMATOL 144533 1% 61% 11
2 JIANGSU BIG DATA ANAL TECH 107511 0% 100% 5
3 HCNR BIOINFORMAT 91735 1% 53% 8
4 NEUROIMMUNOL MOL PATTERN RECOGNIT GRP 64506 0% 100% 3
5 HARVARD NEURODEGENERAT REPAIR 60490 1% 26% 11
6 BIOMED COMP VIS GRP 48853 1% 23% 10
7 CELL BIOL GENOMES GRP 48378 0% 75% 3
8 OERSTED DTU AUTOMAT 48378 0% 75% 3
9 BIOSPECIMENS TUMOR BANK 43004 0% 100% 2
10 CONCEPT OPTIMIZAT MODELLING SYST 43004 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CYTOMETRY PART A 57856 4% 4% 63
2 MEDICAL IMAGE ANALYSIS 30395 3% 4% 40
3 ANALYTICAL AND QUANTITATIVE CYTOLOGY AND HISTOLOGY 26267 3% 3% 47
4 JOURNAL OF MICROSCOPY 22807 4% 2% 52
5 IEEE TRANSACTIONS ON MEDICAL IMAGING 21013 4% 2% 61
6 COMPUTERIZED MEDICAL IMAGING AND GRAPHICS 11995 2% 2% 31
7 ANALYTICAL CELLULAR PATHOLOGY 9498 1% 3% 17
8 IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING 6308 3% 1% 48
9 COMPUTERS IN BIOLOGY AND MEDICINE 4945 2% 1% 26
10 PATTERN RECOGNITION 4720 3% 1% 39

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CELL SEGMENTATION 563962 3% 66% 40 Search CELL+SEGMENTATION Search CELL+SEGMENTATION
2 HISTOPATHOLOGICAL IMAGE ANALYSIS 494548 2% 100% 23 Search HISTOPATHOLOGICAL+IMAGE+ANALYSIS Search HISTOPATHOLOGICAL+IMAGE+ANALYSIS
3 NUCLEI SEGMENTATION 250198 1% 73% 16 Search NUCLEI+SEGMENTATION Search NUCLEI+SEGMENTATION
4 TISSUE COUNTER ANALYSIS 165396 1% 77% 10 Search TISSUE+COUNTER+ANALYSIS Search TISSUE+COUNTER+ANALYSIS
5 NUCLEAR SEGMENTATION 145135 1% 75% 9 Search NUCLEAR+SEGMENTATION Search NUCLEAR+SEGMENTATION
6 CLUMP SPLITTING 137610 1% 80% 8 Search CLUMP+SPLITTING Search CLUMP+SPLITTING
7 MITOSIS DETECTION 110581 0% 86% 6 Search MITOSIS+DETECTION Search MITOSIS+DETECTION
8 DIGITAL PATHOLOGY 110216 2% 18% 29 Search DIGITAL+PATHOLOGY Search DIGITAL+PATHOLOGY
9 BREAST CANCER GRADING 107511 0% 100% 5 Search BREAST+CANCER+GRADING Search BREAST+CANCER+GRADING
10 PAP SMEAR IMAGES 107511 0% 100% 5 Search PAP+SMEAR+IMAGES Search PAP+SMEAR+IMAGES

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 CHEN, C , WANG, W , OZOLEK, JA , ROHDE, GK , (2013) A FLEXIBLE AND ROBUST APPROACH FOR SEGMENTING CELL NUCLEI FROM 2D MICROSCOPY IMAGES USING SUPERVISED LEARNING AND TEMPLATE MATCHING.CYTOMETRY PART A. VOL. 83A. ISSUE 5. P. 495 -507 42 86% 17
2 ARSLAN, S , ERSAHIN, T , CETIN-ATALAY, R , GUNDUZ-DEMIR, C , (2013) ATTRIBUTED RELATIONAL GRAPHS FOR CELL NUCLEUS SEGMENTATION IN FLUORESCENCE MICROSCOPY IMAGES.IEEE TRANSACTIONS ON MEDICAL IMAGING. VOL. 32. ISSUE 6. P. 1121 -1131 28 88% 8
3 MATULA, P , MASKA, M , SOROKIN, DV , MATULA, P , ORTIZ-DE-SOLORZANO, C , KOZUBEK, M , (2015) CELL TRACKING ACCURACY MEASUREMENT BASED ON COMPARISON OF ACYCLIC ORIENTED GRAPHS.PLOS ONE. VOL. 10. ISSUE 12. P. - 24 92% 1
4 XU, J , XIANG, L , LIU, QS , GILMORE, H , WU, JZ , TANG, JH , MADABHUSHI, A , (2016) STACKED SPARSE AUTOENCODER (SSAE) FOR NUCLEI DETECTION ON BREAST CANCER HISTOPATHOLOGY IMAGES.IEEE TRANSACTIONS ON MEDICAL IMAGING. VOL. 35. ISSUE 1. P. 119 -130 23 74% 4
5 LU, C , XU, HM , XU, J , GILMORE, H , MANDAL, M , MADABHUSHI, A , (2016) MULTI-PASS ADAPTIVE VOTING FOR NUCLEI DETECTION IN HISTOPATHOLOGICAL IMAGES.SCIENTIFIC REPORTS. VOL. 6. ISSUE . P. - 26 84% 0
6 MEIJERING, E , SMAL, I , VAN CAPPELLEN, WA , DZYUBACHYK, O , (2009) TRACKING IN CELL AND DEVELOPMENTAL BIOLOGY.SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY. VOL. 20. ISSUE 8. P. 894 -902 42 49% 86
7 KOYUNCU, CF , AKHAN, E , ERSAHIN, T , CETIN-ATALAY, R , GUNDUZ-DEMIR, C , (2016) ITERATIVE H-MINIMA-BASED MARKER-CONTROLLED WATERSHED FOR CELL NUCLEUS SEGMENTATION.CYTOMETRY PART A. VOL. 89A. ISSUE 4. P. 338 -349 21 100% 0
8 MASKA, M , ULMAN, V , SVOBODA, D , MATULA, P , MATULA, P , EDERRA, C , URBIOLA, A , ESPANA, T , VENKATESAN, S , BALAK, DMW , ET AL (2014) A BENCHMARK FOR COMPARISON OF CELL TRACKING ALGORITHMS.BIOINFORMATICS. VOL. 30. ISSUE 11. P. 1609-1617 19 79% 48
9 MEIJERING, E , DZYUBACHYK, O , SMAL, I , (2012) METHODS FOR CELL AND PARTICLE TRACKING.IMAGING AND SPECTROSCOPIC ANALYSIS OF LIVING CELLS: OPTICAL AND SPECTROSCOPIC TECHNIQUES. VOL. 504. ISSUE . P. 183 -200 20 53% 330
10 BARKER, J , HOOGI, A , DEPEURSINGE, A , RUBIN, DL , (2016) AUTOMATED CLASSIFICATION OF BRAIN TUMOR TYPE IN WHOLE-SLIDE DIGITAL PATHOLOGY IMAGES USING LOCAL REPRESENTATIVE TILES.MEDICAL IMAGE ANALYSIS. VOL. 30. ISSUE . P. 60 -71 30 59% 1

Classes with closest relation at Level 1


Rank Class id link
1 16973 ANALYTICAL AND QUANTITATIVE CYTOLOGY AND HISTOLOGY//MALIGNANCY ASSOCIATED CHANGES//KARYOMETRY
2 11243 HIGH CONTENT SCREENING//LOCATION PROTEOMICS//BIOIMAGE INFORMAT
3 36979 ANGIOGENESIS PROCESS//GRP DIGITAL SIGNAL PROC//INFORMAT TECHNOL DATA ANAL METHODS
4 28868 CELLULAR SOCIOLOGY//SYNTACTIC STRUCTURE ANALYSIS//HIGH CONTENT IMAGE EXPLORATION
5 2200 ACTIVE CONTOURS//IMAGE SEGMENTATION//ACTIVE CONTOUR MODEL
6 20080 NEURITE TRACING//CYBERNET VIS GRP//NEUROINFORMATICS
7 6212 MULTILEVEL THRESHOLDING//IMAGE THRESHOLDING//IMAGE SEGMENTATION
8 13383 TELEPATHOLOGY//VIRTUAL MICROSCOPY//VIRTUAL SLIDE
9 18748 LIGHT SHEET MICROSCOPY//LIGHT SHEET FLUORESCENCE MICROSCOPY//SELECTIVE PLANE ILLUMINATION MICROSCOPY
10 20348 INTENSITY LOSS//FIELD ILLUMINATION//ZEISS

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