Class information for:
Level 1: CYTOCHROME C//ALKALINE TRANSITION//CYTOCHROME C2

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
5950 1553 44.1 66%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
3 4 PLANT SCIENCES//AGRONOMY//FOOD SCIENCE & TECHNOLOGY 1882812
415 3       LACCASE//DECOLORIZATION//LIGNIN PEROXIDASE 28941
1092 2             PEROXIDASE//REVERSE MICELLES//CHLOROPEROXIDASE 9840
5950 1                   CYTOCHROME C//ALKALINE TRANSITION//CYTOCHROME C2 1553

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CYTOCHROME C authKW 569590 21% 9% 327
2 ALKALINE TRANSITION authKW 254790 1% 72% 18
3 CYTOCHROME C2 authKW 139790 1% 44% 16
4 ALKALINE ISOMERIZATION authKW 117963 0% 100% 6
5 HEME LIGATION authKW 98302 0% 100% 5
6 ISO 1 CYTOCHROME C authKW 87573 0% 64% 7
7 YEAST ISO 1 CYTOCHROME C authKW 81917 0% 83% 5
8 HUMAN CYTOCHROME C authKW 78642 0% 100% 4
9 CYTOCHROMES C authKW 75823 1% 43% 9
10 POLYANION BINDING authKW 70213 0% 71% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 13405 75% 0% 1157
2 Biophysics 4872 21% 0% 324
3 Chemistry, Inorganic & Nuclear 804 9% 0% 140
4 Chemistry, Multidisciplinary 158 10% 0% 149
5 Cell Biology 52 5% 0% 80
6 Chemistry, Physical 39 7% 0% 106
7 Biochemical Research Methods 34 3% 0% 40
8 Spectroscopy 25 2% 0% 28
9 Evolutionary Biology 0 1% 0% 8
10 Crystallography 0 1% 0% 11

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOMOL STRUCT DYNAM 55285 1% 13% 22
2 INVEST CIENT ISLA DE LA CARTUJA CICCARTUJA 39321 0% 100% 2
3 FREE RAD ANTIOXIDANT HLTH 32899 1% 14% 12
4 INQUIMAE CONICET UBA 29488 0% 50% 3
5 CIIB 22926 0% 17% 7
6 DIPARTIMENTO MED SPERIMENTALE SCI BIOCHIM 22786 1% 6% 19
7 AISTKANSAI 19660 0% 100% 1
8 ANALIT QUIM FIS 19660 0% 100% 1
9 BIOCHEM AH5 206 19660 0% 100% 1
10 BIOENGN BIOINFOMIAT 19660 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 33951 4% 3% 59
2 BIOCHEMISTRY 23206 16% 0% 251
3 BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY 3611 1% 1% 20
4 EUROPEAN JOURNAL OF BIOCHEMISTRY 3268 4% 0% 58
5 PROTEIN SCIENCE 3159 2% 1% 32
6 JOURNAL OF INORGANIC BIOCHEMISTRY 3100 2% 1% 30
7 JOURNAL OF MOLECULAR BIOLOGY 3054 4% 0% 61
8 JOURNAL OF PROTEIN CHEMISTRY 1873 1% 1% 12
9 BIOPHYSICAL CHEMISTRY 1311 1% 0% 17
10 ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 1283 2% 0% 34

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CYTOCHROME C 569590 21% 9% 327 Search CYTOCHROME+C Search CYTOCHROME+C
2 ALKALINE TRANSITION 254790 1% 72% 18 Search ALKALINE+TRANSITION Search ALKALINE+TRANSITION
3 CYTOCHROME C2 139790 1% 44% 16 Search CYTOCHROME+C2 Search CYTOCHROME+C2
4 ALKALINE ISOMERIZATION 117963 0% 100% 6 Search ALKALINE+ISOMERIZATION Search ALKALINE+ISOMERIZATION
5 HEME LIGATION 98302 0% 100% 5 Search HEME+LIGATION Search HEME+LIGATION
6 ISO 1 CYTOCHROME C 87573 0% 64% 7 Search ISO+1+CYTOCHROME+C Search ISO+1+CYTOCHROME+C
7 YEAST ISO 1 CYTOCHROME C 81917 0% 83% 5 Search YEAST+ISO+1+CYTOCHROME+C Search YEAST+ISO+1+CYTOCHROME+C
8 HUMAN CYTOCHROME C 78642 0% 100% 4 Search HUMAN+CYTOCHROME+C Search HUMAN+CYTOCHROME+C
9 CYTOCHROMES C 75823 1% 43% 9 Search CYTOCHROMES+C Search CYTOCHROMES+C
10 POLYANION BINDING 70213 0% 71% 5 Search POLYANION+BINDING Search POLYANION+BINDING

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 ZAIDI, S , HASSAN, MI , ISLAM, A , AHMAD, F , (2014) THE ROLE OF KEY RESIDUES IN STRUCTURE, FUNCTION, AND STABILITY OF CYTOCHROME-C.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 71. ISSUE 2. P. 229-255 188 61% 20
2 HANNIBAL, L , TOMASINA, F , CAPDEVILA, DA , DEMICHELI, V , TORTORA, V , ALVAREZ-PAGGI, D , JEMMERSON, R , MURGIDA, DH , RADI, R , (2016) ALTERNATIVE CONFORMATIONS OF CYTOCHROME C: STRUCTURE, FUNCTION, AND DETECTION.BIOCHEMISTRY. VOL. 55. ISSUE 3. P. 407 -428 109 59% 4
3 MUENZNER, J , PLETNEVA, EV , (2014) STRUCTURAL TRANSFORMATIONS OF CYTOCHROME C UPON INTERACTION WITH CARDIOLIPIN.CHEMISTRY AND PHYSICS OF LIPIDS. VOL. 179. ISSUE . P. 57-63 80 82% 14
4 CAPDEVILA, DA , ROUCO, SO , TOMASINA, F , TORTORA, V , DEMICHELI, V , RADI, R , MURGIDA, DH , (2015) ACTIVE SITE STRUCTURE AND PEROXIDASE ACTIVITY OF OXIDATIVELY MODIFIED CYTOCHROME C SPECIES IN COMPLEXES WITH CARDIOLIPIN.BIOCHEMISTRY. VOL. 54. ISSUE 51. P. 7491 -7504 62 87% 1
5 AMACHER, JF , ZHONG, FF , LISI, GP , ZHU, MQ , ALDEN, SL , HOKE, KR , MADDEN, DR , PLETNEVA, EV , (2015) A COMPACT STRUCTURE OF CYTOCHROME C TRAPPED IN A LYSINE-LIGATED STATE: LOOP REFOLDING AND FUNCTIONAL IMPLICATIONS OF A CONFORMATIONAL SWITCH.JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. VOL. 137. ISSUE 26. P. 8435 -8449 65 63% 12
6 TOGNACCINI, L , CIACCIO, C , D'ORIA, V , CERVELLI, M , HOWES, BD , COLETTA, M , MARIOTTINI, P , SMULEVICH, G , FIORUCCI, L , (2016) STRUCTURE-FUNCTION RELATIONSHIPS IN HUMAN CYTOCHROME C: THE ROLE OF TYROSINE 67.JOURNAL OF INORGANIC BIOCHEMISTRY. VOL. 155. ISSUE . P. 56 -66 49 70% 3
7 BANDI, S , BOWLER, BE , (2015) EFFECT OF AN ALA81HIS MUTATION ON THE MET80 LOOP DYNAMICS OF ISO-1-CYTOCHROME C.BIOCHEMISTRY. VOL. 54. ISSUE 9. P. 1729 -1742 50 79% 2
8 JOSEPHS, TM , LIPTAK, MD , HUGHES, G , LO, A , SMITH, RM , WILBANKS, SM , BREN, KL , LEDGERWOOD, EC , (2013) CONFORMATIONAL CHANGE AND HUMAN CYTOCHROME C FUNCTION: MUTATION OF RESIDUE 41 MODULATES CASPASE ACTIVATION AND DESTABILIZES MET-80 COORDINATION.JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY. VOL. 18. ISSUE 3. P. 289-297 45 90% 8
9 MCCLELLAND, LJ , MOU, TC , JEAKINS-COOLEY, ME , SPRANG, SR , BOWLER, BE , (2014) STRUCTURE OF A MITOCHONDRIAL CYTOCHROME C CONFORMER COMPETENT FOR PEROXIDASE ACTIVITY.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. VOL. 111. ISSUE 18. P. 6648-6653 39 91% 17
10 SERPAS, L , MILOREY, B , PANDISCIA, LA , ADDISON, AW , SCHWEITZER-STENNER, R , (2016) AUTOXIDATION OF REDUCED HORSE HEART CYTOCHROME C CATALYZED BY CARDIOLIPIN-CONTAINING MEMBRANES.JOURNAL OF PHYSICAL CHEMISTRY B. VOL. 120. ISSUE 48. P. 12219 -12231 52 73% 0

Classes with closest relation at Level 1


Rank Class id link
1 14795 CYTOCHROME C//SURFACE ENHANCED RESONANCE RAMAN SPECTROSCOPY//PROTEIN MONOLAYER ELECTROCHEMISTRY
2 25165 MICROPEROXIDASE 11//HEME PEPTIDE//MICROPEROXIDASE
3 10102 CYTOCHROME C PEROXIDASE//RADIATION INDUCED INACTIVATION//RECOMBINANT HORSERADISH PEROXIDASE
4 14058 CYTOCHROME B5//NADH CYTOCHROME B5 REDUCTASE//CYTOCHROME B5 REDUCTASE
5 11673 DSBA//CYTOCHROME C MATURATION//DSBD
6 9405 CYTOCHROME C3//MULTIHEME CYTOCHROME//CYTOCHROME C NITRITE REDUCTASE
7 5534 PLASTOCYANIN//BLUE COPPER PROTEIN//AZURIN
8 19864 FIXL//COOA//GAS SENSOR PROTEINS
9 5455 MOLTEN GLOBULE//ALPHA LACTALBUMIN//APOMYOGLOBIN
10 37525 CYTOSOLIC NADH OXIDATION//EXOGENOUS NADH//EXTRAMITOCHONDRIAL CYTOCHROME C

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