Class information for:
Level 1: INTEGRON//GENE CASSETTES//CLASS 1 INTEGRON

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
3811 1901 35.6 72%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
73 3       MICROBIOLOGY//INFECTIOUS DISEASES//STAPHYLOCOCCUS AUREUS 82747
233 2             ACINETOBACTER BAUMANNII//EXTENDED SPECTRUM BETA LACTAMASE//ESBL 20247
3811 1                   INTEGRON//GENE CASSETTES//CLASS 1 INTEGRON 1901

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 INTEGRON authKW 1108475 10% 37% 188
2 GENE CASSETTES authKW 555190 3% 52% 66
3 CLASS 1 INTEGRON authKW 222061 2% 30% 46
4 ANTIMICROBIAL RESISTANCE authKW 207401 11% 6% 200
5 CONTAINMENT OF RESISTANCE authKW 96366 0% 100% 6
6 FOODBORNE ZOONOSES address 85865 3% 10% 51
7 CRITICALLY IMPORTANT ANTIMICROBIALS authKW 82598 0% 86% 6
8 BRISTOL ANTIMICROBIAL address 80305 0% 100% 5
9 OFF ANIM PLANT HLTH SAFETY address 80305 0% 100% 5
10 ANIM HLTH SCI EMERGENCY MANAGEMENT BRANCH address 66919 0% 83% 5

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 28243 51% 0% 963
2 Veterinary Sciences 9821 26% 0% 492
3 Infectious Diseases 6069 17% 0% 329
4 Pharmacology & Pharmacy 1638 19% 0% 363
5 Biotechnology & Applied Microbiology 1034 11% 0% 212
6 Food Science & Technology 903 9% 0% 170
7 Agriculture, Dairy & Animal Science 253 3% 0% 60
8 Agricultural Economics & Policy 52 0% 0% 8
9 Genetics & Heredity 46 4% 0% 68
10 Public, Environmental & Occupational Health 26 3% 0% 57

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 FOODBORNE ZOONOSES 85865 3% 10% 51
2 BRISTOL ANTIMICROBIAL 80305 0% 100% 5
3 OFF ANIM PLANT HLTH SAFETY 80305 0% 100% 5
4 ANIM HLTH SCI EMERGENCY MANAGEMENT BRANCH 66919 0% 83% 5
5 EASSA STUDY GRP 64244 0% 100% 4
6 FDN HOP ST JOSEPH 64240 0% 67% 6
7 VET EPIDEMIOL UNIT 62897 1% 17% 23
8 EA3175 60531 0% 54% 7
9 UNITE PLAST GENOME BACTERIEN 59473 1% 37% 10
10 JOINT FOOD SAFETY 57358 0% 71% 5

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MICROBIAL DRUG RESISTANCE 41996 3% 5% 55
2 FOODBORNE PATHOGENS AND DISEASE 35340 3% 4% 57
3 PREVENTIVE VETERINARY MEDICINE 23507 4% 2% 73
4 JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY 11752 5% 1% 96
5 PLASMID 9116 2% 2% 34
6 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 8855 6% 0% 115
7 ZOONOSES AND PUBLIC HEALTH 7622 1% 3% 19
8 INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS 7347 2% 1% 42
9 REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES 5174 1% 2% 21
10 CANADIAN JOURNAL OF VETERINARY RESEARCH-REVUE CANADIENNE DE RECHERCHE VETERINAIRE 3481 1% 1% 20

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 INTEGRON 1108475 10% 37% 188 Search INTEGRON Search INTEGRON
2 GENE CASSETTES 555190 3% 52% 66 Search GENE+CASSETTES Search GENE+CASSETTES
3 CLASS 1 INTEGRON 222061 2% 30% 46 Search CLASS+1+INTEGRON Search CLASS+1+INTEGRON
4 ANTIMICROBIAL RESISTANCE 207401 11% 6% 200 Search ANTIMICROBIAL+RESISTANCE Search ANTIMICROBIAL+RESISTANCE
5 CONTAINMENT OF RESISTANCE 96366 0% 100% 6 Search CONTAINMENT+OF+RESISTANCE Search CONTAINMENT+OF+RESISTANCE
6 CRITICALLY IMPORTANT ANTIMICROBIALS 82598 0% 86% 6 Search CRITICALLY+IMPORTANT+ANTIMICROBIALS Search CRITICALLY+IMPORTANT+ANTIMICROBIALS
7 VETCAB 64244 0% 100% 4 Search VETCAB Search VETCAB
8 ANTIBIOTIC RESISTANCE 64180 8% 3% 151 Search ANTIBIOTIC+RESISTANCE Search ANTIBIOTIC+RESISTANCE
9 ANTIMICROBIAL RESISTANCE IN AGRICULTURAL SETTINGS 57815 0% 60% 6 Search ANTIMICROBIAL+RESISTANCE+IN+AGRICULTURAL+SETTINGS Search ANTIMICROBIAL+RESISTANCE+IN+AGRICULTURAL+SETTINGS
10 PRUDENT USE 57815 0% 60% 6 Search PRUDENT+USE Search PRUDENT+USE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 GILLINGS, MR , (2014) INTEGRONS: PAST, PRESENT, AND FUTURE.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 78. ISSUE 2. P. 257 -277 138 59% 44
2 COIERA, E , IREDELL, JR , PARTRIDGE, SR , TSAFNAT, G , (2009) GENE CASSETTES AND CASSETTE ARRAYS IN MOBILE RESISTANCE INTEGRONS.FEMS MICROBIOLOGY REVIEWS. VOL. 33. ISSUE 4. P. 757 -784 72 64% 179
3 CAMBRAY, G , GUEROUT, AM , MAZEL, D , (2010) INTEGRONS.ANNUAL REVIEW OF GENETICS, VOL 44. VOL. 44. ISSUE . P. 141 -166 70 63% 166
4 MAZEL, D , (2006) INTEGRONS: AGENTS OF BACTERIAL EVOLUTION.NATURE REVIEWS MICROBIOLOGY. VOL. 4. ISSUE 8. P. 608 -620 59 74% 362
5 DOMINGUES, S , DA SILVA, GJ , NIELSEN, KM , (2015) GLOBAL DISSEMINATION PATTERNS OF COMMON GENE CASSETTE ARRAYS IN CLASS 1 INTEGRONS.MICROBIOLOGY-SGM. VOL. 161. ISSUE . P. 1313 -1337 113 48% 0
6 BARRAUD, O , PLOY, MC , (2011) ANTIBIOTIC RESISTANT INTEGRONS: STATE OF THE ART.JOURNAL DES ANTI-INFECTIEUX. VOL. 13. ISSUE 3. P. 133 -144 97 60% 2
7 HALL, RM , (2012) INTEGRONS AND GENE CASSETTES: HOTSPOTS OF DIVERSITY IN BACTERIAL GENOMES.EFFECTS OF GENOME STRUCTURE AND SEQUENCE ON VARIATION AND EVOLUTION. VOL. 1267. ISSUE . P. 71-78 52 91% 36
8 DI CONZA, JA , GUTKIND, GO , (2010) INTEGRONS: GENE COLLECTORS.REVISTA ARGENTINA DE MICROBIOLOGIA. VOL. 42. ISSUE 1. P. 63 -78 76 71% 8
9 STOKES, HW , GILLINGS, MR , (2011) GENE FLOW, MOBILE GENETIC ELEMENTS AND THE RECRUITMENT OF ANTIBIOTIC RESISTANCE GENES INTO GRAM-NEGATIVE PATHOGENS.FEMS MICROBIOLOGY REVIEWS. VOL. 35. ISSUE 5. P. 790 -819 98 37% 98
10 DENG, Y , BAO, XR , JI, LL , CHEN, L , LIU, JY , MIAO, J , CHEN, DQ , BIAN, HW , LI, YM , YU, GC , (2015) RESISTANCE INTEGRONS: CLASS 1, 2 AND 3 INTEGRONS.ANNALS OF CLINICAL MICROBIOLOGY AND ANTIMICROBIALS. VOL. 14. ISSUE . P. - 51 74% 8

Classes with closest relation at Level 1


Rank Class id link
1 5167 ANTIBIOTIC RESISTANCE GENES//ANTIBIOTIC RESISTANCE//RESISTOME
2 36102 BUNDES INFEKTIONSKRANKHEITEN NICHT UBERTRAG//CONJUGAL GENE TRANSFER//GUT MICROCOSMS
3 17979 SPHEROIDAL GRANULE//AFRICAN RESISTANCE SURVEY//ANTI MICROBIAL RESISTANCE SURVEILLANCE
4 774 SALMONELLA//PHAGE TYPE//DT104
5 14430 QNR//AAC6 IB CR//PLASMID MEDIATED QUINOLONE RESISTANCE
6 19677 ISEPAMICIN//AACC2//DEV OURCES PLANT
7 5567 EXPEC//AVIAN PATHOGENIC ESCHERICHIA COLI//AVIAN COLIBACILLOSIS
8 99 EXTENDED SPECTRUM BETA LACTAMASE//ESBL//CTX M
9 34435 MIC DETERMINATIONS//HGEBIET AGRARINFORMAT UNTERNEHMENSFUHRUNG//LEBENSMITTEL TIERI ER HERKUNFT
10 23152 SEGMENTED FILAMENTOUS BACTERIA//CANDIDATUS ARTHROMITUS//HUMAN FLORA ASSOCIATED MICE

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