Class information for:
Level 1: TRNA MODIFICATION//QUEUINE//RNA MODIFICATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
3592 1948 42.2 69%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
1084 2             AMINOACYL TRNA SYNTHETASE//TRNA//AMINOACYL TRANSFER RNA SYNTHETASE 9879
3592 1                   TRNA MODIFICATION//QUEUINE//RNA MODIFICATION 1948

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 TRNA MODIFICATION authKW 583162 3% 61% 61
2 QUEUINE authKW 456427 2% 94% 31
3 RNA MODIFICATION authKW 376940 3% 38% 63
4 TRNA authKW 271201 7% 13% 136
5 PSEUDOURIDINE authKW 267402 2% 37% 46
6 QUEUOSINE authKW 259089 1% 72% 23
7 PSEUDOURIDINE SYNTHASE authKW 243846 1% 68% 23
8 MODIFIED NUCLEOSIDES authKW 197823 3% 25% 50
9 MNME authKW 135459 1% 79% 11
10 TRNA GUANINE TRANSGLYCOSYLASE authKW 125388 0% 100% 8

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 17849 77% 0% 1492
2 Biophysics 2005 12% 0% 243
3 Cell Biology 627 11% 0% 215
4 Biochemical Research Methods 357 5% 0% 106
5 Microbiology 237 6% 0% 118
6 Genetics & Heredity 93 4% 0% 85
7 Crystallography 81 2% 0% 47
8 Chemistry, Organic 31 4% 0% 70
9 Chemistry, Medicinal 15 2% 0% 32
10 Mathematical & Computational Biology 9 1% 0% 14

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 OHIO STATE RNA BIOL 78367 0% 100% 5
2 RNA MODIFICAT MITOCHONDRIAL DIS 65304 0% 83% 5
3 ENZYMOL BIOCHIM STRUCT 57828 2% 8% 44
4 IFR115UMR8621 50154 0% 80% 4
5 NODE U721 47020 0% 100% 3
6 RIEVE L S MASS SPE OMETRY 43863 1% 20% 14
7 BIOINFORMAT PROT ENGN 37325 1% 11% 21
8 RECH MICROBIOL JEAN MARIE WIAME 35822 0% 57% 4
9 PHARM INTER PROGRAM MED CHEM 35264 0% 75% 3
10 MATURAT ARN ENZYMOL MOL 33332 1% 21% 10

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RNA 60504 5% 4% 99
2 NUCLEIC ACIDS RESEARCH 22734 12% 1% 240
3 RNA-A PUBLICATION OF THE RNA SOCIETY 16810 2% 3% 37
4 JOURNAL OF MOLECULAR BIOLOGY 5575 5% 0% 92
5 BIOCHIMIE 5472 2% 1% 46
6 RNA BIOLOGY 4906 1% 2% 17
7 RECENT RESULTS IN CANCER RESEARCH 3598 1% 2% 11
8 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS 2917 1% 1% 24
9 BIOCHEMISTRY 2688 5% 0% 98
10 NUCLEOSIDES & NUCLEOTIDES 2337 1% 2% 10

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 TRNA MODIFICATION 583162 3% 61% 61 Search TRNA+MODIFICATION Search TRNA+MODIFICATION
2 QUEUINE 456427 2% 94% 31 Search QUEUINE Search QUEUINE
3 RNA MODIFICATION 376940 3% 38% 63 Search RNA+MODIFICATION Search RNA+MODIFICATION
4 TRNA 271201 7% 13% 136 Search TRNA Search TRNA
5 PSEUDOURIDINE 267402 2% 37% 46 Search PSEUDOURIDINE Search PSEUDOURIDINE
6 QUEUOSINE 259089 1% 72% 23 Search QUEUOSINE Search QUEUOSINE
7 PSEUDOURIDINE SYNTHASE 243846 1% 68% 23 Search PSEUDOURIDINE+SYNTHASE Search PSEUDOURIDINE+SYNTHASE
8 MODIFIED NUCLEOSIDES 197823 3% 25% 50 Search MODIFIED+NUCLEOSIDES Search MODIFIED+NUCLEOSIDES
9 MNME 135459 1% 79% 11 Search MNME Search MNME
10 TRNA GUANINE TRANSGLYCOSYLASE 125388 0% 100% 8 Search TRNA+GUANINE+TRANSGLYCOSYLASE Search TRNA+GUANINE+TRANSGLYCOSYLASE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 HORI, H , (2014) METHYLATED NUCLEOSIDES IN TRNA AND TRNA METHYLTRANSFERASES.FRONTIERS IN GENETICS. VOL. 5. ISSUE . P. - 201 77% 24
2 SWINEHART, WE , JACKMAN, JE , (2015) DIVERSITY IN MECHANISM AND FUNCTION OF TRNA METHYLTRANSFERASES.RNA BIOLOGY. VOL. 12. ISSUE 4. P. 398 -411 99 77% 3
3 FERGUS, C , BARNES, D , ALQASEM, MA , KELLY, VP , (2015) THE QUEUINE MICRONUTRIENT: CHARTING A COURSE FROM MICROBE TO MAN.NUTRIENTS. VOL. 7. ISSUE 4. P. 2897 -2929 92 77% 7
4 SPENKUCH, F , MOTORIN, Y , HELM, M , (2014) PSEUDOURIDINE: STILL MYSTERIOUS, BUT NEVER A FAKE (URIDINE)!.RNA BIOLOGY. VOL. 11. ISSUE 12. P. 1540 -1554 116 62% 8
5 EL YACOUBI, B , BAILLY, M , DE CRECY-LAGARD, V , (2012) BIOSYNTHESIS AND FUNCTION OF POSTTRANSCRIPTIONAL MODIFICATIONS OF TRANSFER RNAS.ANNUAL REVIEW OF GENETICS, VOL 46. VOL. 46. ISSUE . P. 69 -95 86 67% 101
6 VINAYAK, M , PATHAK, C , (2010) QUEUOSINE MODIFICATION OF TRNA: ITS DIVERGENT ROLE IN CELLULAR MACHINERY.BIOSCIENCE REPORTS. VOL. 30. ISSUE 2. P. 135-148 94 63% 15
7 DUECHLER, M , LESZCZYNSKA, G , SOCHACKA, E , NAWROT, B , (2016) NUCLEOSIDE MODIFICATIONS IN THE REGULATION OF GENE EXPRESSION: FOCUS ON TRNA.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 73. ISSUE 16. P. 3075 -3095 93 45% 3
8 ARMENGOD, ME , MESEGUER, S , VILLARROYA, M , PRADO, S , MOUKADIRI, I , RUIZ-PARTIDA, R , GARZON, MJ , NAVARRO-GONZALEZ, C , MARTINEZ-ZAMORA, A , (2014) MODIFICATION OF THE WOBBLE URIDINE IN BACTERIAL AND MITOCHONDRIAL TRNAS READING NNA/NNG TRIPLETS OF 2-CODON BOXES.RNA BIOLOGY. VOL. 11. ISSUE 12. P. 1495 -1507 72 69% 5
9 SUZUKI, T , SUZUKI, T , (2014) A COMPLETE LANDSCAPE OF POST-TRANSCRIPTIONAL MODIFICATIONS IN MAMMALIAN MITOCHONDRIAL TRNAS.NUCLEIC ACIDS RESEARCH. VOL. 42. ISSUE 11. P. 7346 -7357 57 66% 45
10 ISHIDA, K , KUNIBAYASHI, T , TOMIKAWA, C , OCHI, A , KANAI, T , HIRATA, A , IWASHITA, C , HORI, H , (2011) PSEUDOURIDINE AT POSITION 55 IN TRNA CONTROLS THE CONTENTS OF OTHER MODIFIED NUCLEOTIDES FOR LOW-TEMPERATURE ADAPTATION IN THE EXTREME-THERMOPHILIC EUBACTERIUM THERMUS THERMOPHILUS.NUCLEIC ACIDS RESEARCH. VOL. 39. ISSUE 6. P. 2304 -2318 55 89% 12

Classes with closest relation at Level 1


Rank Class id link
1 25121 KSGA//DIM1//DIMETHYLTRANSFERASE
2 16988 DNMT2//ALKB//N 6 METHYLADENOSINE
3 19084 TRNASE Z//TRNA NUCLEOTIDYLTRANSFERASE//CCA ADDING ENZYME
4 31973 PUPYLATION//PROKARYOTIC UBIQUITIN LIKE PROTEIN//PAFA
5 27692 RNA IMPORT//TRNA IMPORT//IMPORT FACTOR
6 6806 TRANSLATION TERMINATION//RELEASE FACTOR//FRAMESHIFT
7 4461 SNORNA//SMALL NUCLEOLAR RNA//PRE RRNA PROCESSING
8 21689 OBG//RBFA//DRG2
9 1298 AMINOACYL TRNA SYNTHETASE//AMINOACYL TRANSFER RNA SYNTHETASE//AMINOACYLATION
10 18504 URINARY NUCLEOSIDES//BORONATE AFFINITY//CIS DIOL CONTAINING COMPOUNDS

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