Class information for:
Level 1: SYNGAP1//GENES COGNIT PROGRAMME//SYNGAP

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
27910 218 49.8 90%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
11 4 NEUROSCIENCES//CLINICAL NEUROLOGY//NEUROL 1112395
100 3       NEUROSCIENCES//METABOTROPIC GLUTAMATE RECEPTOR//HIPPOCAMPUS 73970
891 2             POSTSYNAPTIC DENSITY//LONG TERM POTENTIATION//SYNAPTIC PLASTICITY 11396
27910 1                   SYNGAP1//GENES COGNIT PROGRAMME//SYNGAP 218

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SYNGAP1 authKW 814952 4% 73% 8
2 GENES COGNIT PROGRAMME address 657537 6% 36% 13
3 SYNGAP authKW 448216 4% 40% 8
4 MOL PHYSIOL SYN SE address 315157 1% 75% 3
5 GENES COGNIT address 280141 1% 100% 2
6 SYNAPTIC PROTEOME authKW 280141 1% 100% 2
7 POSTSYNAPTIC DENSITY authKW 227495 14% 5% 30
8 6P213 MICRODELETION authKW 140071 0% 100% 1
9 ACTIN FILAMENT BINDING PROTEIN authKW 140071 0% 100% 1
10 CA2 CALMODULIN DEPENDENT PROTEIN TO ASSOCIATE WITH LIPID KINASE II CLUSTER authKW 140071 0% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Neurosciences 1260 44% 0% 97
2 Biochemical Research Methods 952 22% 0% 49
3 Biochemistry & Molecular Biology 200 28% 0% 61
4 Genetics & Heredity 26 6% 0% 13
5 Psychiatry 20 5% 0% 10
6 Cell Biology 15 6% 0% 14
7 Mathematical & Computational Biology 15 2% 0% 4
8 Substance Abuse 14 1% 0% 3
9 Biology 11 3% 0% 6
10 Biotechnology & Applied Microbiology 5 4% 0% 8

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 GENES COGNIT PROGRAMME 657537 6% 36% 13
2 MOL PHYSIOL SYN SE 315157 1% 75% 3
3 GENES COGNIT 280141 1% 100% 2
4 CARDIOLHHMI 140071 0% 100% 1
5 FARMACOL TOXOCOL 140071 0% 100% 1
6 GRP RECH SUR SYST NERVEUX CENT 140071 0% 100% 1
7 IDDRC PSYCHIAT BIOBEHAV SCI 140071 0% 100% 1
8 INSERM PATHOPHYSIOL PSYCHIAT DIS U894 140071 0% 100% 1
9 JUSTINE 140071 0% 100% 1
10 KLIN NEUROPEDIAT U ANGEBORENE STOFFWECHSELERKRANK 140071 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR & CELLULAR PROTEOMICS 5490 5% 0% 11
2 PROTEOMICS 2437 5% 0% 10
3 PROTEOMICS CLINICAL APPLICATIONS 2428 2% 0% 4
4 PROTEOME SCIENCE 2265 1% 1% 3
5 EXPERT REVIEW OF PROTEOMICS 1716 1% 0% 3
6 JOURNAL OF PROTEOME RESEARCH 818 3% 0% 6
7 JOURNAL OF NEUROCHEMISTRY 801 5% 0% 11
8 MOLECULAR SYSTEMS BIOLOGY 737 1% 0% 2
9 CANCER GENOMICS & PROTEOMICS 665 0% 0% 1
10 NATURE NEUROSCIENCE 576 2% 0% 4

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SYNGAP1 814952 4% 73% 8 Search SYNGAP1 Search SYNGAP1
2 SYNGAP 448216 4% 40% 8 Search SYNGAP Search SYNGAP
3 SYNAPTIC PROTEOME 280141 1% 100% 2 Search SYNAPTIC+PROTEOME Search SYNAPTIC+PROTEOME
4 POSTSYNAPTIC DENSITY 227495 14% 5% 30 Search POSTSYNAPTIC+DENSITY Search POSTSYNAPTIC+DENSITY
5 6P213 MICRODELETION 140071 0% 100% 1 Search 6P213+MICRODELETION Search 6P213+MICRODELETION
6 ACTIN FILAMENT BINDING PROTEIN 140071 0% 100% 1 Search ACTIN+FILAMENT+BINDING+PROTEIN Search ACTIN+FILAMENT+BINDING+PROTEIN
7 CA2 CALMODULIN DEPENDENT PROTEIN TO ASSOCIATE WITH LIPID KINASE II CLUSTER 140071 0% 100% 1 Search CA2+CALMODULIN+DEPENDENT+PROTEIN+TO+ASSOCIATE+WITH+LIPID+KINASE+II+CLUSTER Search CA2+CALMODULIN+DEPENDENT+PROTEIN+TO+ASSOCIATE+WITH+LIPID+KINASE+II+CLUSTER
8 EEG NORMALIZATION BY EYE OPENING 140071 0% 100% 1 Search EEG+NORMALIZATION+BY+EYE+OPENING Search EEG+NORMALIZATION+BY+EYE+OPENING
9 FORE BRAIN CORTEX 140071 0% 100% 1 Search FORE+BRAIN+CORTEX Search FORE+BRAIN+CORTEX
10 HYPOTHALAMUS AND LIPOTOXICITY 140071 0% 100% 1 Search HYPOTHALAMUS+AND+LIPOTOXICITY Search HYPOTHALAMUS+AND+LIPOTOXICITY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 MIGNOT, C , VON STULPNAGEL, C , NAVA, C , VILLE, D , SANLAVILLE, D , LESCA, G , RASTETTER, A , GACHET, B , MARIE, Y , KORENKE, GC , ET AL (2016) GENETIC AND NEURODEVELOPMENTAL SPECTRUM OF SYNGAP1-ASSOCIATED INTELLECTUAL DISABILITY AND EPILEPSY.JOURNAL OF MEDICAL GENETICS. VOL. 53. ISSUE 8. P. 511 -522 18 50% 4
2 STOCKTON, SD , DEVI, LA , (2014) AN INTEGRATED QUANTITATIVE PROTEOMICS AND SYSTEMS BIOLOGY APPROACH TO EXPLORE SYNAPTIC PROTEIN PROFILE CHANGES DURING MORPHINE EXPOSURE.NEUROPSYCHOPHARMACOLOGY. VOL. 39. ISSUE 1. P. 88 -103 28 32% 4
3 EMES, RD , GRANT, SGN , (2011) THE HUMAN POSTSYNAPTIC DENSITY SHARES CONSERVED ELEMENTS WITH PROTEOMES OF UNICELLULAR EUKARYOTES AND PROKARYOTES.FRONTIERS IN NEUROSCIENCE. VOL. 5. ISSUE . P. - 21 43% 8
4 JEYABALAN, N , CLEMENTE, JP , (2016) SYNGAP1: MIND THE GAP.FRONTIERS IN CELLULAR NEUROSCIENCE. VOL. 10. ISSUE . P. - 26 23% 4
5 DIETERICH, DC , KREUTZ, MR , (2016) PROTEOMICS OF THE SYNAPSE - A QUANTITATIVE APPROACH TO NEURONAL PLASTICITY.MOLECULAR & CELLULAR PROTEOMICS. VOL. 15. ISSUE 2. P. 368 -381 31 17% 6
6 MCMAHON, AC , BARNETT, MW , O'LEARY, TS , STONEY, PN , COLLINS, MO , PAPADIA, S , CHOUDHARY, JS , KOMIYAMA, NH , GRANT, SGN , HARDINGHAM, GE , ET AL (2012) SYNGAP ISOFORMS EXERT OPPOSING EFFECTS ON SYNAPTIC STRENGTH.NATURE COMMUNICATIONS. VOL. 3. ISSUE . P. - 14 50% 14
7 EMES, RD , GRANT, SGN , (2012) EVOLUTION OF SYNAPSE COMPLEXITY AND DIVERSITY.ANNUAL REVIEW OF NEUROSCIENCE, VOL 35. VOL. 35. ISSUE . P. 111-131 21 30% 35
8 ARAKI, Y , ZENG, ML , ZHANG, MJ , HUGANIR, RL , (2015) RAPID DISPERSION OF SYNGAP FROM SYNAPTIC SPINES TRIGGERS AMPA RECEPTOR INSERTION AND SPINE ENLARGEMENT DURING LTP.NEURON. VOL. 85. ISSUE 1. P. 173 -189 16 31% 22
9 BERRYER, MH , HAMDAN, FF , KLITTEN, LL , MOLLER, RS , CARMANT, L , SCHWARTZENTRUBER, J , PATRY, L , DOBRZENIECKA, S , ROCHEFORT, D , NEUGNOT-CERIOLI, M , ET AL (2013) MUTATIONS IN SYNGAP1 CAUSE INTELLECTUAL DISABILITY, AUTISM, AND A SPECIFIC FORM OF EPILEPSY BY INDUCING HAPLOINSUFFICIENCY.HUMAN MUTATION. VOL. 34. ISSUE 2. P. 385-394 12 48% 36
10 CRONING, MDR , MARSHALL, MC , MCLAREN, P , ARMSTRONG, JD , GRANT, SGN , (2009) G2CDB: THE GENES TO COGNITION DATABASE.NUCLEIC ACIDS RESEARCH. VOL. 37. ISSUE . P. D846 -D851 14 48% 30

Classes with closest relation at Level 1


Rank Class id link
1 25919 BIOCHEM PROTE GRP//NEUROCIENCIAS LIM 27//PSYCHOEDUC SERV
2 7158 AMPA RECEPTOR//STARGAZIN//PICK1
3 11898 PDZ DOMAIN//SYNTENIN//MAGUK
4 16099 SHANK3//HOMER//HOMER PROTEINS
5 6883 PREFRACTIONATION//FASP//SDS REMOVAL
6 4280 CAMKII//CA2 CALMODULIN DEPENDENT PROTEIN KINASE II//CAM KINASE II
7 5230 DENDRITIC SPINES//DREBRIN//PERFORATED SYNAPSES
8 11614 LOCAL PROTEIN SYNTHESIS//AXONAL PROTEIN SYNTHESIS//LOCAL TRANSLATION
9 24074 NEUROPLASTIN//CEREBELLAR SOLUBLE LECTIN//8 HP ADOLESCENT PSYCHOPATHOL MED
10 15664 NEUROLIGIN//NEUREXIN//NRXN1

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