Class information for:
Level 1: LUNG MICROBIOME//CF AIRWAYS MICROBIOL GRP//SAHMRI INFECT IMMUN THEME

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
20942 440 51.3 87%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
169 3       AGRICULTURE, DAIRY & ANIMAL SCIENCE//POULTRY SCIENCE//BROILER 59415
278 2             PROBIOTICS//MICROBIOTA//GUT MICROBIOTA 19126
20942 1                   LUNG MICROBIOME//CF AIRWAYS MICROBIOL GRP//SAHMRI INFECT IMMUN THEME 440

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LUNG MICROBIOME authKW 444141 2% 80% 8
2 CF AIRWAYS MICROBIOL GRP address 312280 2% 50% 9
3 SAHMRI INFECT IMMUN THEME address 261569 2% 54% 7
4 OROPHARYNGEAL FLORA authKW 222071 1% 80% 4
5 CYST FIBROSIS UNIT address 212494 5% 15% 21
6 GUT LUNG AXIS authKW 208193 1% 100% 3
7 MICROBIOME authKW 142848 13% 4% 58
8 BACTERIOL VIROL HYG PARASITOL MYCOL address 138795 0% 100% 2
9 CYST FIBROSIS MICROBIOL CYST FIBROSIS address 138795 0% 100% 2
10 ADULT CYST FIBROSIS CLIN address 126886 2% 23% 8

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 5498 47% 0% 205
2 Respiratory System 5102 28% 0% 124
3 Critical Care Medicine 1146 10% 0% 45
4 Allergy 425 5% 0% 21
5 Infectious Diseases 214 7% 0% 32
6 Immunology 208 12% 0% 53
7 Parasitiology 83 3% 0% 13
8 Virology 64 3% 0% 15
9 Multidisciplinary Sciences 27 2% 0% 7
10 Ecology 18 3% 0% 15

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CF AIRWAYS MICROBIOL GRP 312280 2% 50% 9
2 SAHMRI INFECT IMMUN THEME 261569 2% 54% 7
3 CYST FIBROSIS UNIT 212494 5% 15% 21
4 BACTERIOL VIROL HYG PARASITOL MYCOL 138795 0% 100% 2
5 CYST FIBROSIS MICROBIOL CYST FIBROSIS 138795 0% 100% 2
6 ADULT CYST FIBROSIS CLIN 126886 2% 23% 8
7 GENOM HLTH AREA 111031 1% 40% 4
8 NO IRELAND REG ADULT CYST FIBROSIS UNIT 104093 1% 50% 3
9 HLTH PROTECT AGCY SE 89222 1% 43% 3
10 ADULT CYST FIBROSIS CLINFOOTHILLS MED 69398 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MICROBIOME 75771 3% 7% 15
2 ISME JOURNAL 7727 3% 1% 14
3 LANCET RESPIRATORY MEDICINE 6612 1% 2% 5
4 JOURNAL OF CYSTIC FIBROSIS 5765 2% 1% 9
5 AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE 4467 6% 0% 25
6 CURRENT OPINION IN PULMONARY MEDICINE 2753 2% 1% 7
7 NATURE MICROBIOLOGY 2148 0% 2% 2
8 MBIO 1928 2% 0% 7
9 PLOS ONE 1859 16% 0% 69
10 EXPERT REVIEW OF RESPIRATORY MEDICINE 1488 1% 1% 3

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 LUNG MICROBIOME 444141 2% 80% 8 Search LUNG+MICROBIOME Search LUNG+MICROBIOME
2 OROPHARYNGEAL FLORA 222071 1% 80% 4 Search OROPHARYNGEAL+FLORA Search OROPHARYNGEAL+FLORA
3 GUT LUNG AXIS 208193 1% 100% 3 Search GUT+LUNG+AXIS Search GUT+LUNG+AXIS
4 MICROBIOME 142848 13% 4% 58 Search MICROBIOME Search MICROBIOME
5 AIRWAY MICROBIOME 124913 1% 60% 3 Search AIRWAY+MICROBIOME Search AIRWAY+MICROBIOME
6 454 PYROSEQUENING 69398 0% 100% 1 Search 454+PYROSEQUENING Search 454+PYROSEQUENING
7 AIRWAY ADAPTIVE IMMUNITY 69398 0% 100% 1 Search AIRWAY+ADAPTIVE+IMMUNITY Search AIRWAY+ADAPTIVE+IMMUNITY
8 AIRWAY BACTERIAL COMMUNITY 69398 0% 100% 1 Search AIRWAY+BACTERIAL+COMMUNITY Search AIRWAY+BACTERIAL+COMMUNITY
9 AIRWAY ECOLOGY 69398 0% 100% 1 Search AIRWAY+ECOLOGY Search AIRWAY+ECOLOGY
10 AIRWAY MICROBIOTA 69398 0% 100% 1 Search AIRWAY+MICROBIOTA Search AIRWAY+MICROBIOTA

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 CAVERLY, LJ , ZHAO, JC , LIPUMA, JJ , (2015) CYSTIC FIBROSIS LUNG MICROBIOME: OPPORTUNITIES TO RECONSIDER MANAGEMENT OF AIRWAY INFECTION.PEDIATRIC PULMONOLOGY. VOL. 50. ISSUE . P. S31 -S38 49 82% 9
2 DICKSON, RP , ERB-DOWNWARD, JR , MARTINEZ, FJ , HUFFNAGLE, GB , (2016) THE MICROBIOME AND THE RESPIRATORY TRACT.ANNUAL REVIEW OF PHYSIOLOGY, VOL 78. VOL. 78. ISSUE . P. 481 -504 43 44% 13
3 DICKSON, RP , ERB-DOWNWARD, JR , HUFFNAGLE, GB , (2013) THE ROLE OF THE BACTERIAL MICROBIOME IN LUNG DISEASE.EXPERT REVIEW OF RESPIRATORY MEDICINE. VOL. 7. ISSUE 3. P. 245-257 46 47% 52
4 HUANG, YJ , LIPUMA, JJ , (2016) THE MICROBIOME IN CYSTIC FIBROSIS.CLINICS IN CHEST MEDICINE. VOL. 37. ISSUE 1. P. 59 -+ 31 48% 7
5 HUFFNAGLE, GB , DICKSON, RP , (2015) THE BACTERIAL MICROBIOTA IN INFLAMMATORY LUNG DISEASES.CLINICAL IMMUNOLOGY. VOL. 159. ISSUE 2. P. 177 -182 38 48% 8
6 SHERRARD, LJ , BELL, SC , TUNNEY, MM , (2016) THE ROLE OF ANAEROBIC BACTERIA IN THE CYSTIC FIBROSIS AIRWAY.CURRENT OPINION IN PULMONARY MEDICINE. VOL. 22. ISSUE 6. P. 637 -643 31 61% 0
7 CRIBBS, SK , BECK, JM , (2017) MICROBIOME IN THE PATHOGENESIS OF CYSTIC FIBROSIS AND LUNG TRANSPLANT-RELATED DISEASE.TRANSLATIONAL RESEARCH. VOL. 179. ISSUE . P. 84 -96 52 35% 0
8 LI, JG , HAO, CY , REN, LL , XIAO, Y , WANG, JW , QIN, XM , (2016) DATA MINING OF LUNG MICROBIOTA IN CYSTIC FIBROSIS PATIENTS.PLOS ONE. VOL. 11. ISSUE 10. P. - 30 61% 0
9 ANDREJAK, C , DELHAES, L , (2015) THE LUNG MICROBIOME IN 2015: A WINDOW ON CHRONIC LUNG DISEASES.M S-MEDECINE SCIENCES. VOL. 31. ISSUE 11. P. 971 -978 27 64% 4
10 WHITESON, KL , BAILEY, B , BERGKESSEL, M , CONRAD, D , DELHAES, L , FELTS, B , HARRIS, JK , HUNTER, R , LIM, YW , MAUGHAN, H , ET AL (2014) THE UPPER RESPIRATORY TRACT AS A MICROBIAL SOURCE FOR PULMONARY INFECTIONS IN CYSTIC FIBROSIS: PARALLELS FROM ISLAND BIOGEOGRAPHY.AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. VOL. 189. ISSUE 11. P. 1309-1315 34 49% 12

Classes with closest relation at Level 1


Rank Class id link
1 1803 METAGENOMICS//MICROBIOME//HUMAN MICROBIOME
2 2574 CYSTIC FIBROSIS//PULMONARY EXACERBATION//JOURNAL OF CYSTIC FIBROSIS
3 4307 LUCILLE CASTORI MICROBES INFLAMMAT CANC//MUCOSAL IMMUNOLOGY//MICROBIOTA
4 10725 PSEUDOMONAS AERUGINOSA//OE 6710//LIVERPOOL EPIDEMIC STRAIN
5 21722 PEDIAT P ALLERGY UNITS//ABERHART 8226A//ALLERGY CAESAREAN SECTION
6 14758 STREPTOCOCCUS MILLERI//STREPTOCOCCUS CONSTELLATUS//STREPTOCOCCUS ANGINOSUS
7 14406 BRONCHIECTASIS//MIDDLE LOBE SYNDROME//ADULT BRONCHIECTASIS SERV
8 5869 BURKHOLDERIA CEPACIA COMPLEX//BURKHOLDERIA CEPACIA//BURKHOLDERIA CENOCEPACIA
9 5994 EXACERBATION//CHRONIC OBSTRUCTIVE PULMONARY DISEASE//COPD
10 20615 SECONDARY BACTERIAL PNEUMONIA//RICHARD K MELLON FDN//VIRAL BACTERIAL SYNERGISM

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