Class information for:
Level 1: SERIAL SECTIONS//RAT EMBRYOLOGY//COMPUTED IMAGE ALIGNMENT

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
20291 467 23.3 49%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
10 4 OPTICS//PHYSICS, PARTICLES & FIELDS//PHYSICS, MULTIDISCIPLINARY 1131262
359 3       JOURNAL OF BIOMEDICAL OPTICS//BIOMEDICAL OPTICS EXPRESS//OPTICS 34746
1278 2             NANOBIOPHOTON//SUPER RESOLUTION MICROSCOPY//HIGH CONTENT SCREENING 8720
20291 1                   SERIAL SECTIONS//RAT EMBRYOLOGY//COMPUTED IMAGE ALIGNMENT 467

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 SERIAL SECTIONS authKW 175050 4% 15% 18
2 RAT EMBRYOLOGY authKW 147115 1% 75% 3
3 COMPUTED IMAGE ALIGNMENT authKW 130770 0% 100% 2
4 PIXEL SIMILARITY MEASURE authKW 130770 0% 100% 2
5 SECTION ALIGNMENT authKW 130770 0% 100% 2
6 SERIALLY ACQUIRED IMAGES authKW 130770 0% 100% 2
7 THREE DIMENSIONAL COMPUTER ASSISTED RECONSTRUCTION authKW 130770 0% 100% 2
8 2 D SERIALLY ACQUIRED IMAGES authKW 65385 0% 100% 1
9 2D 2D REGISTRATION authKW 65385 0% 100% 1
10 3 DIMENSIONAL ATLAS authKW 65385 0% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microscopy 5063 11% 0% 53
2 Anatomy & Morphology 4151 13% 0% 61
3 Engineering, Biomedical 1318 14% 0% 64
4 Biochemical Research Methods 1274 18% 0% 84
5 Medical Informatics 910 6% 0% 26
6 Computer Science, Interdisciplinary Applications 851 12% 0% 56
7 Neurosciences 808 26% 0% 120
8 Radiology, Nuclear Medicine & Medical Imaging 614 15% 0% 70
9 Neuroimaging 179 3% 0% 12
10 Imaging Science & Photographic Technology 158 3% 0% 13

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CORE UNIT COMPUTAT MICROSCOPY 65385 0% 100% 1
2 DENT IAL ORTHOPED 65385 0% 100% 1
3 IMAGERIE AD TAT DIAGNOST INTERVENT IADI U947 65385 0% 100% 1
4 IMAGINE1 65385 0% 100% 1
5 INSA LYONCNRSUMR5220U1044 65385 0% 100% 1
6 INSERM CIT801 65385 0% 100% 1
7 MCGOWAN REGENERAT IMAGING 65385 0% 100% 1
8 MED NEUROL NEURO IMAGING 65385 0% 100% 1
9 MEDUMR 7004 65385 0% 100% 1
10 NEUOIMAGING 65385 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF NEUROSCIENCE METHODS 50035 16% 1% 75
2 COMPUTERS AND BIOMEDICAL RESEARCH 15357 3% 2% 14
3 COMPUTER PROGRAMS IN BIOMEDICINE 7288 1% 2% 5
4 JOURNAL OF MICROSCOPY-OXFORD 5758 3% 1% 15
5 COMPUTERIZED MEDICAL IMAGING AND GRAPHICS 4594 2% 1% 11
6 ANATOMICAL RECORD 4484 3% 0% 16
7 JOURNAL OF ELECTRON MICROSCOPY TECHNIQUE 4387 1% 1% 7
8 ANALYTICAL AND QUANTITATIVE CYTOLOGY AND HISTOLOGY 3609 2% 1% 10
9 COMPUTER APPLICATIONS IN THE BIOSCIENCES 2578 1% 1% 6
10 STAIN TECHNOLOGY 1658 1% 1% 4

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 SERIAL SECTIONS 175050 4% 15% 18 Search SERIAL+SECTIONS Search SERIAL+SECTIONS
2 RAT EMBRYOLOGY 147115 1% 75% 3 Search RAT+EMBRYOLOGY Search RAT+EMBRYOLOGY
3 COMPUTED IMAGE ALIGNMENT 130770 0% 100% 2 Search COMPUTED+IMAGE+ALIGNMENT Search COMPUTED+IMAGE+ALIGNMENT
4 PIXEL SIMILARITY MEASURE 130770 0% 100% 2 Search PIXEL+SIMILARITY+MEASURE Search PIXEL+SIMILARITY+MEASURE
5 SECTION ALIGNMENT 130770 0% 100% 2 Search SECTION+ALIGNMENT Search SECTION+ALIGNMENT
6 SERIALLY ACQUIRED IMAGES 130770 0% 100% 2 Search SERIALLY+ACQUIRED+IMAGES Search SERIALLY+ACQUIRED+IMAGES
7 THREE DIMENSIONAL COMPUTER ASSISTED RECONSTRUCTION 130770 0% 100% 2 Search THREE+DIMENSIONAL+COMPUTER+ASSISTED+RECONSTRUCTION Search THREE+DIMENSIONAL+COMPUTER+ASSISTED+RECONSTRUCTION
8 2 D SERIALLY ACQUIRED IMAGES 65385 0% 100% 1 Search 2+D+SERIALLY+ACQUIRED+IMAGES Search 2+D+SERIALLY+ACQUIRED+IMAGES
9 2D 2D REGISTRATION 65385 0% 100% 1 Search 2D+2D+REGISTRATION Search 2D+2D+REGISTRATION
10 3 DIMENSIONAL ATLAS 65385 0% 100% 1 Search 3+DIMENSIONAL+ATLAS Search 3+DIMENSIONAL+ATLAS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 KVASNICKA, HM , THIELE, J , (1995) 3-DIMENSIONAL RECONSTRUCTION OF SERIAL SECTIONS IN LIGHT-MICROSCOPY.PATHOLOGE. VOL. 16. ISSUE 2. P. 128-137 32 65% 3
2 CIFOR, A , BAI, L , PITIOT, A , (2011) SMOOTHNESS-GUIDED 3-D RECONSTRUCTION OF 2-D HISTOLOGICAL IMAGES.NEUROIMAGE. VOL. 56. ISSUE 1. P. 197 -211 18 62% 17
3 PALM, C , VIETEN, A , SALBER, D , PIETRZYK, U , (2009) EVALUATION OF REGISTRATION STRATEGIES FOR MULTI-MODALITY IMAGES OF RAT BRAIN SLICES.PHYSICS IN MEDICINE AND BIOLOGY. VOL. 54. ISSUE 10. P. 3269 -3289 18 67% 5
4 ANDREASEN, A , DREWES, AM , ASSENTOFT, JE , LARSEN, NE , (1992) COMPUTER-ASSISTED ALIGNMENT OF STANDARD SERIAL SECTIONS WITHOUT USE OF ARTIFICIAL LANDMARKS - A PRACTICAL APPROACH TO THE UTILIZATION OF INCOMPLETE INFORMATION IN 3-D RECONSTRUCTION OF THE HIPPOCAMPAL REGION.JOURNAL OF NEUROSCIENCE METHODS. VOL. 45. ISSUE 3. P. 199-207 20 87% 37
5 PALM, C , AXER, M , GRASSEL, D , DAMMERS, J , LINDEMEYER, J , ZILLES, K , PIETRZYK, U , AMUNTS, K , (2010) TOWARDS ULTRA-HIGH RESOLUTION FIBRE TRACT MAPPING OF THE HUMAN BRAIN - REGISTRATION OF POLARISED LIGHT IMAGES AND REORIENTATION OF FIBRE VECTORS.FRONTIERS IN HUMAN NEUROSCIENCE. VOL. 4. ISSUE . P. - 21 47% 8
6 STREICHER, J , WENINGER, TJ , MULLER, GB , (1997) EXTERNAL MARKER-BASED AUTOMATIC CONGRUENCING: A NEW METHOD OF 3D RECONSTRUCTION FROM SERIAL SECTIONS.ANATOMICAL RECORD. VOL. 248. ISSUE 4. P. 583-602 21 62% 60
7 YANG, ZY , RICHARDS, K , KURNIAWAN, ND , PETROU, S , REUTENS, DC , (2012) MRI-GUIDED VOLUME RECONSTRUCTION OF MOUSE BRAIN FROM HISTOLOGICAL SECTIONS.JOURNAL OF NEUROSCIENCE METHODS. VOL. 211. ISSUE 2. P. 210-217 15 58% 13
8 GAFFLING, S , DAUM, V , STEIDL, S , MAIER, A , KOSTLER, H , HORNEGGER, J , (2015) A GAUSS-SEIDEL ITERATION SCHEME FOR REFERENCE-FREE 3-D HISTOLOGICAL IMAGE RECONSTRUCTION.IEEE TRANSACTIONS ON MEDICAL IMAGING. VOL. 34. ISSUE 2. P. 514 -530 14 56% 4
9 HAAS, A , FISCHER, MS , (1997) THREE-DIMENSIONAL RECONSTRUCTION OF HISTOLOGICAL SECTIONS USING MODERN PRODUCT-DESIGN SOFTWARE.ANATOMICAL RECORD. VOL. 249. ISSUE 4. P. 510-516 17 77% 18
10 WENINGER, WJ , MENG, S , STREICHER, J , MULLER, GB , (1998) A NEW EPISCOPIC METHOD FOR RAPID 3-D RECONSTRUCTION: APPLICATIONS IN ANATOMY AND EMBRYOLOGY.ANATOMY AND EMBRYOLOGY. VOL. 197. ISSUE 5. P. 341-348 17 71% 41

Classes with closest relation at Level 1


Rank Class id link
1 15237 MOUSE IMAGING//WAXHOLM SPACE//MAGNETIC RESONANCE MICROSCOPY
2 2125 IMAGE REGISTRATION//NON RIGID REGISTRATION//DEFORMABLE IMAGE REGISTRATION
3 20080 NEURITE TRACING//CYBERNET VIS GRP//NEUROINFORMATICS
4 31422 ASTROCYTIC SHEATH//CIRCUIT REORGANIZATION//ANTI CALBINDIN D 28 K
5 26624 3D IMAGE INTERPOLATION//BRANCHING SURFACES//SHAPE BASED INTERPOLATION
6 26515 VISIBLE HUMAN PROJECTS//VISIBLE HUMAN//CHINESE VISIBLE HUMAN CVH
7 19891 CORRELATIVE MICROSCOPY//CORRELATIVE LIGHT AND ELECTRON MICROSCOPY//SBFSEM
8 37668 ACTIVITY OF COLLAGENASES//CONDUCTION SYSTEM FINDINGS IN SUDDEN DEATH//FINLAND FORENSIC MEDICINE
9 12085 RAPID PROTOTYPING//STEREOLITHOGRAPHY//BIOMODELLING
10 14893 BRAIN PROTEIN SYNTHESIS//L S 35METHIONINE//LUMPED CONSTANT

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