Class information for:
Level 1: PHENYLALANINE AMMONIA LYASE//PHENYLALANINE AMMONIA LYASE PAL//AMMONIA LYASE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
12410 908 33.5 60%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
3 4 PLANT SCIENCES//AGRONOMY//FOOD SCIENCE & TECHNOLOGY 1882812
152 3       HORTICULTURE//HORTSCIENCE//JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE 62774
1411 2             ANTHOCYANINS//CHALCONE SYNTHASE//ANTHOCYANIN BIOSYNTHESIS 8008
12410 1                   PHENYLALANINE AMMONIA LYASE//PHENYLALANINE AMMONIA LYASE PAL//AMMONIA LYASE 908

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHENYLALANINE AMMONIA LYASE authKW 1389003 18% 25% 165
2 PHENYLALANINE AMMONIA LYASE PAL authKW 261719 3% 32% 24
3 AMMONIA LYASE authKW 214146 1% 58% 11
4 PHENYLALANINE AMINOMUTASE authKW 168139 1% 100% 5
5 AMINOMUTASES authKW 153720 1% 57% 8
6 2 AMINOINDAN 2 PHOSPHONIC ACID authKW 134503 1% 50% 8
7 TYROSINE AMMONIA LYASE authKW 113263 1% 42% 8
8 CHALCONE SYNTHASE authKW 102123 4% 9% 32
9 HEBEI FERMENTAT ENGN address 76860 0% 57% 4
10 L PHENYLALANINE AMMONIA LYASE PAL authKW 67256 0% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Plant Sciences 9312 44% 0% 404
2 Biochemistry & Molecular Biology 1981 40% 0% 365
3 Biotechnology & Applied Microbiology 650 13% 0% 114
4 Biophysics 157 6% 0% 53
5 Cell Biology 82 7% 0% 63
6 Horticulture 47 1% 0% 13
7 Chemistry, Multidisciplinary 33 7% 0% 65
8 Microbiology 31 4% 0% 36
9 Food Science & Technology 31 3% 0% 30
10 Agronomy 27 2% 0% 19

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 HEBEI FERMENTAT ENGN 76860 0% 57% 4
2 PLANT GROWTH REGULAT 50433 1% 25% 6
3 BIOCATALYSIS BIOTRANSFORMAT GRP 48908 0% 36% 4
4 TAI DEV AREA 44836 0% 67% 2
5 BIOCHEM CARL VONLINNE WEG 33628 0% 100% 1
6 BIOL MOLEC PLANTES CNRS 33628 0% 100% 1
7 BIOL SCI MOL BIOL GRP 33628 0% 100% 1
8 BIOTECHNOL CROP QUAL IMPROVEMENTMINIST 33628 0% 100% 1
9 COMPUTAT CHEM UK 33628 0% 100% 1
10 GENOM QUAL CAFE 33628 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PLANTA 6709 5% 0% 42
2 PLANT MOLECULAR BIOLOGY 3623 3% 0% 27
3 PHYTOCHEMISTRY 3445 5% 0% 48
4 PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY 3051 1% 1% 13
5 STUDIA UNIVERSITATIS BABES-BOLYAI CHEMIA 2254 1% 1% 8
6 ZEITSCHRIFT FUR NATURFORSCHUNG SECTION C-A JOURNAL OF BIOSCIENCES 2242 2% 0% 18
7 JOURNAL OF PLANT PHYSIOLOGY 1828 2% 0% 20
8 PLANT PHYSIOLOGY 1490 3% 0% 31
9 PHYSIOLOGIA PLANTARUM 1396 2% 0% 19
10 PLANT PHYSIOLOGY AND BIOCHEMISTRY 1276 1% 0% 13

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PHENYLALANINE AMMONIA LYASE 1389003 18% 25% 165 Search PHENYLALANINE+AMMONIA+LYASE Search PHENYLALANINE+AMMONIA+LYASE
2 PHENYLALANINE AMMONIA LYASE PAL 261719 3% 32% 24 Search PHENYLALANINE+AMMONIA+LYASE+PAL Search PHENYLALANINE+AMMONIA+LYASE+PAL
3 AMMONIA LYASE 214146 1% 58% 11 Search AMMONIA+LYASE Search AMMONIA+LYASE
4 PHENYLALANINE AMINOMUTASE 168139 1% 100% 5 Search PHENYLALANINE+AMINOMUTASE Search PHENYLALANINE+AMINOMUTASE
5 AMINOMUTASES 153720 1% 57% 8 Search AMINOMUTASES Search AMINOMUTASES
6 2 AMINOINDAN 2 PHOSPHONIC ACID 134503 1% 50% 8 Search 2+AMINOINDAN+2+PHOSPHONIC+ACID Search 2+AMINOINDAN+2+PHOSPHONIC+ACID
7 TYROSINE AMMONIA LYASE 113263 1% 42% 8 Search TYROSINE+AMMONIA+LYASE Search TYROSINE+AMMONIA+LYASE
8 CHALCONE SYNTHASE 102123 4% 9% 32 Search CHALCONE+SYNTHASE Search CHALCONE+SYNTHASE
9 L PHENYLALANINE AMMONIA LYASE PAL 67256 0% 100% 2 Search L+PHENYLALANINE+AMMONIA+LYASE+PAL Search L+PHENYLALANINE+AMMONIA+LYASE+PAL
10 OENOTHERA BERTERIANA 67256 0% 100% 2 Search OENOTHERA+BERTERIANA Search OENOTHERA+BERTERIANA

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 KONG, JQ , (2015) PHENYLALANINE AMMONIA-LYASE, A KEY COMPONENT USED FOR PHENYLPROPANOIDS PRODUCTION BY METABOLIC ENGINEERING.RSC ADVANCES. VOL. 5. ISSUE 77. P. 62587 -62603 90 51% 4
2 CUI, JD , QIU, JQ , FAN, XW , JIA, SR , TAN, ZL , (2014) BIOTECHNOLOGICAL PRODUCTION AND APPLICATIONS OF MICROBIAL PHENYLALANINE AMMONIA LYASE: A RECENT REVIEW.CRITICAL REVIEWS IN BIOTECHNOLOGY. VOL. 34. ISSUE 3. P. 258 -268 66 69% 8
3 MACDONALD, MJ , D'CUNHA, GB , (2007) A MODERN VIEW OF PHENYLALANINE AMMONIA LYASE.BIOCHEMISTRY AND CELL BIOLOGY-BIOCHIMIE ET BIOLOGIE CELLULAIRE. VOL. 85. ISSUE 3. P. 273-282 47 81% 124
4 PILBAK, S , FARKAS, O , POPPE, L , (2012) MECHANISM OF THE TYROSINE AMMONIA LYASE REACTION-TANDEM NUCLEOPHILIC AND ELECTROPHILIC ENHANCEMENT BY A PROTON TRANSFER.CHEMISTRY-A EUROPEAN JOURNAL. VOL. 18. ISSUE 25. P. 7793-7802 39 80% 11
5 WEISER, D , BENCZE, LC , BANOCZI, G , ENDER, F , KISS, R , KOKAI, E , SZILAGYI, A , VERTESSY, BG , FARKAS, O , PAIZS, C , ET AL (2015) PHENYLALANINE AMMONIA-LYASE-CATALYZED DEAMINATION OF AN ACYCLIC AMINO ACID: ENZYME MECHANISTIC STUDIES AIDED BY A NOVEL MICROREACTOR FILLED WITH MAGNETIC NANOPARTICLES.CHEMBIOCHEM. VOL. 16. ISSUE 16. P. 2283 -2288 40 74% 0
6 ZHANG, XB , LIU, CJ , (2015) MULTIFACETED REGULATIONS OF GATEWAY ENZYME PHENYLALANINE AMMONIA-LYASE IN THE BIOSYNTHESIS OF PHENYLPROPANOIDS.MOLECULAR PLANT. VOL. 8. ISSUE 1. P. 17 -27 43 49% 12
7 PILBAK, S , TOMIN, A , RETEY, J , POPPE, L , (2006) THE ESSENTIAL TYROSINE-CONTAINING LOOP CONFORMATION AND THE ROLE OF THE C-TERMINAL MULTI-HELIX REGION IN EUKARYOTIC PHENYLALANINE AMMONIA-LYASES.FEBS JOURNAL. VOL. 273. ISSUE 5. P. 1004-1019 40 71% 28
8 WALTER, T , WIJEWARDENA, D , WALKER, KD , (2016) MUTATION OF ARYL BINDING POCKET RESIDUES RESULTS IN AN UNEXPECTED ACTIVITY SWITCH IN AN ORYZA SATIVA TYROSINE AMINOMUTASE.BIOCHEMISTRY. VOL. 55. ISSUE 25. P. 3497 -3503 27 87% 0
9 MA, WL , WU, M , WU, Y , REN, ZM , ZHONG, Y , (2013) CLONING AND CHARACTERISATION OF A PHENYLALANINE AMMONIA-LYASE GENE FROM RHUS CHINENSIS.PLANT CELL REPORTS. VOL. 32. ISSUE 8. P. 1179-1190 33 73% 5
10 REICHERT, AI , HE, XZ , DIXON, RA , (2009) PHENYLALANINE AMMONIA-LYASE (PAL) FROM TOBACCO (NICOTIANA TABACUM): CHARACTERIZATION OF THE FOUR TOBACCO PAL GENES AND ACTIVE HETEROTETRAMERIC ENZYMES.BIOCHEMICAL JOURNAL. VOL. 424. ISSUE . P. 233-242 32 80% 26

Classes with closest relation at Level 1


Rank Class id link
1 19902 TYPE III POLYKETIDE SYNTHASE//CHALCONE SYNTHASE//BENZALACETONE SYNTHASE
2 20194 PISATIN DEMETHYLASE//ISOFLAVONE SYNTHASE//GLYCYRRHIZA ECHINATA
3 8928 ELICITOR//PHYSIOLOGICAL PLANT PATHOLOGY//OLIGOGALACTURONIDES
4 5069 LIGNIN BIOSYNTHESIS//CINNAMYL ALCOHOL DEHYDROGENASE//O METHYLTRANSFERASE
5 24309 HISTIDASE//HISTIDINEMIA//HUTP
6 2151 ANTHOCYANINS//ANTHOCYANIN BIOSYNTHESIS//FLAVONOID BIOSYNTHESIS
7 23900 ASPARTASE//MALEATE CIS TRANS ISOMERASE//MALEATE HYDRATASE
8 19686 CINNAMATE 4 HYDROXYLASE//ENZYMOL CELLULAIRE MOL//TULIPA FOSTERIANA
9 26499 PR 10//PR 10 GENES//PATHOGENESIS RELATED PROTEIN 10
10 13820 RBCS MULTIGENE FAMILY//CAB GENES//RBCS

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