Class information for:
Level 1: CAPRI//PROTEIN PROTEIN DOCKING//PROTEIN DOCKING

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
5503 1548 49.5 86%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
42 31225 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//PROTEIN FOLDING

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 CAPRI Author keyword 73 75% 3% 52
2 PROTEIN PROTEIN DOCKING Author keyword 60 48% 6% 93
3 PROTEIN DOCKING Author keyword 34 41% 4% 63
4 SHAPE COMPLEMENTARITY Author keyword 21 61% 1% 23
5 PROTEIN PROTEIN INTERFACES Author keyword 17 59% 1% 19
6 PROTEIN PROTEIN INTERFACE Author keyword 16 54% 1% 20
7 DOCKING MINIMIZATION Author keyword 15 88% 0% 7
8 PROTEIN INTERFACES Author keyword 14 59% 1% 16
9 UNBOUND DOCKING Author keyword 14 100% 0% 7
10 INTERFACE PREDICTION Author keyword 13 61% 1% 14

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 CAPRI 73 75% 3% 52 Search CAPRI Search CAPRI
2 PROTEIN PROTEIN DOCKING 60 48% 6% 93 Search PROTEIN+PROTEIN+DOCKING Search PROTEIN+PROTEIN+DOCKING
3 PROTEIN DOCKING 34 41% 4% 63 Search PROTEIN+DOCKING Search PROTEIN+DOCKING
4 SHAPE COMPLEMENTARITY 21 61% 1% 23 Search SHAPE+COMPLEMENTARITY Search SHAPE+COMPLEMENTARITY
5 PROTEIN PROTEIN INTERFACES 17 59% 1% 19 Search PROTEIN+PROTEIN+INTERFACES Search PROTEIN+PROTEIN+INTERFACES
6 PROTEIN PROTEIN INTERFACE 16 54% 1% 20 Search PROTEIN+PROTEIN+INTERFACE Search PROTEIN+PROTEIN+INTERFACE
7 DOCKING MINIMIZATION 15 88% 0% 7 Search DOCKING+MINIMIZATION Search DOCKING+MINIMIZATION
8 PROTEIN INTERFACES 14 59% 1% 16 Search PROTEIN+INTERFACES Search PROTEIN+INTERFACES
9 UNBOUND DOCKING 14 100% 0% 7 Search UNBOUND+DOCKING Search UNBOUND+DOCKING
10 INTERFACE PREDICTION 13 61% 1% 14 Search INTERFACE+PREDICTION Search INTERFACE+PREDICTION

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 SHAPE COMPLEMENTARITY 137 59% 10% 155
2 CAPRI 112 78% 5% 74
3 GEOMETRIC FIT 103 85% 4% 55
4 STRUCTURALLY CONSERVED RESIDUES 85 92% 2% 34
5 MOLECULAR SURFACE RECOGNITION 39 80% 2% 24
6 INTERACTION SITE PREDICTION 29 88% 1% 14
7 PROTEIN PROTEIN DOCKING 27 31% 5% 73
8 INTERACTION SITES 26 30% 5% 71
9 ROUNDS 3 5 21 78% 1% 14
10 CAPRI EXPERIMENT 19 70% 1% 16

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Exploring the potential of global protein-protein docking: an overview and critical assessment of current programs for automatic ab initio docking 2015 1 86 91%
Search strategies and evaluation in protein-protein docking: principles, advances and challenges 2014 7 160 89%
Reaching for high-hanging fruit in drug discovery at protein-protein interfaces 2007 856 92 20%
Integrative computational modeling of protein interactions 2014 8 106 75%
Recent progress and future directions in protein-protein docking 2008 137 204 68%
Hot spots-A review of the protein-protein interface determinant amino-acid residues 2007 264 103 48%
Protein-protein interaction and quaternary structure 2008 151 190 52%
Principles of protein-protein interactions 1996 1642 36 39%
Protein-protein docking tested in blind predictions: the CAPRI experiment 2010 65 124 77%
A survey of available tools and web servers for analysis of protein-protein interactions and interfaces 2009 71 147 64%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 SACKLER MOL MED 10 17% 3.5% 54
2 HUMAN GENET MOL MED 5 10% 3.2% 49
3 BIOMOL MODELLING 5 23% 1.3% 20
4 IBBMC UMR 8619 4 67% 0.3% 4
5 JOINT BSC IRB PROGRAMME COMPUTAT BIOL 4 38% 0.6% 9
6 JOINT BSC IRB PROGRAM COMPUTAT BIOL 4 32% 0.6% 10
7 BC6 3 100% 0.2% 3
8 CP 263 3 100% 0.2% 3
9 PROGRAM MOL COMPUTAT BIOPHYS 3 32% 0.5% 7
10 CANC NANOBIOL PROGRAM 2 11% 1.4% 21

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000224003 COMPLEX SCI SOFTWARE//3D ZERNIKE DESCRIPTOR//PROTEIN SURFACE SHAPE
2 0.0000183342 INTERACTION PROPENSITY//RNA BINDING RESIDUES//COMPUTAT INTELLIGENCE LEARNING DISCOVERY
3 0.0000159963 DEHYDRON//KINASE TARGETING//ONCOKINOME
4 0.0000157109 VORONOI DIAGRAM//VORONOI DIAGRAM OF SPHERES//BETA SHAPE
5 0.0000149691 COMPUTATIONAL PROTEIN DESIGN//DEAD END ELIMINATION//COMPUTATIONAL ENZYME DESIGN
6 0.0000118288 JOURNAL OF CHEMICAL INFORMATION AND MODELING//VIRTUAL SCREENING//JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
7 0.0000104837 PROTEOMIMETICS//ALPHA HELIX MIMETICS//HELIX MIMETICS
8 0.0000090885 ELECTROSTATIC RATE ENHANCEMENT//ELECTROSTATIC STEERING//WEIGHTED ENSEMBLE BROWNIAN DYNAMICS
9 0.0000077226 CANONICAL STRUCTURES//CDR CONFORMATION//ANTIBODY STRUCTURE
10 0.0000076985 ELASTIC NETWORK MODEL//ELASTIC NETWORK MODELS//NORMAL MODE ANALYSIS