Class information for:
Level 1: ELASTIC NETWORK MODEL//ELASTIC NETWORK MODELS//NORMAL MODE ANALYSIS

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
4652 1677 47.8 81%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
42 31225 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//PROTEIN FOLDING

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 ELASTIC NETWORK MODEL Author keyword 45 60% 3% 50
2 ELASTIC NETWORK MODELS Author keyword 44 88% 1% 21
3 NORMAL MODE ANALYSIS Author keyword 37 30% 6% 102
4 GAUSSIAN NETWORK MODEL Author keyword 20 59% 1% 23
5 LH BAKER BIOINFORMAT BIOL STAT Address 12 42% 1% 23
6 ELASTIC NETWORK Author keyword 11 57% 1% 13
7 B FACTORS Author keyword 9 47% 1% 15
8 MEAN SQUARE FLUCTUATIONS Author keyword 9 83% 0% 5
9 NETWORK RIGIDITY Author keyword 8 75% 0% 6
10 SACKLER MOL MED Address 8 15% 3% 48

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 ELASTIC NETWORK MODEL 45 60% 3% 50 Search ELASTIC+NETWORK+MODEL Search ELASTIC+NETWORK+MODEL
2 ELASTIC NETWORK MODELS 44 88% 1% 21 Search ELASTIC+NETWORK+MODELS Search ELASTIC+NETWORK+MODELS
3 NORMAL MODE ANALYSIS 37 30% 6% 102 Search NORMAL+MODE+ANALYSIS Search NORMAL+MODE+ANALYSIS
4 GAUSSIAN NETWORK MODEL 20 59% 1% 23 Search GAUSSIAN+NETWORK+MODEL Search GAUSSIAN+NETWORK+MODEL
5 ELASTIC NETWORK 11 57% 1% 13 Search ELASTIC+NETWORK Search ELASTIC+NETWORK
6 B FACTORS 9 47% 1% 15 Search B+FACTORS Search B+FACTORS
7 MEAN SQUARE FLUCTUATIONS 9 83% 0% 5 Search MEAN+SQUARE+FLUCTUATIONS Search MEAN+SQUARE+FLUCTUATIONS
8 NETWORK RIGIDITY 8 75% 0% 6 Search NETWORK+RIGIDITY Search NETWORK+RIGIDITY
9 ESSENTIAL DYNAMICS 7 23% 2% 28 Search ESSENTIAL+DYNAMICS Search ESSENTIAL+DYNAMICS
10 HINGE BENDING 7 39% 1% 14 Search HINGE+BENDING Search HINGE+BENDING

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 SINGLE PARAMETER 295 72% 14% 230
2 ELASTIC NETWORK MODEL 144 68% 8% 126
3 FREQUENCY NORMAL MODES 126 67% 7% 113
4 DOMAIN MOTIONS 60 46% 6% 96
5 COLLECTIVE MOTIONS 57 49% 5% 85
6 NORMAL MODE ANALYSIS 55 26% 11% 185
7 ELASTIC NETWORK MODELS 52 64% 3% 51
8 QUANTITATIVE STABILITY FLEXIBILITY RELATIONSHIPS 35 89% 1% 16
9 MACROMOLECULAR MOTIONS 29 54% 2% 38
10 FOLDED PROTEINS 25 30% 4% 70

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Comparing the intrinsic dynamics of multiple protein structures using elastic network models 2015 4 118 83%
Global Dynamics of Proteins: Bridging Between Structure and Function 2010 151 71 85%
The ensemble nature of allostery 2014 69 91 24%
Coarse-grained normal mode analysis in structural biology 2005 347 63 84%
Induced fit, conformational selection and independent dynamic segments: an extended view of binding events 2010 238 62 29%
Allostery in Disease and in Drug Discovery 2013 62 91 24%
Comparing proteins by their internal dynamics: Exploring structure-function relationships beyond static structural alignments 2013 21 155 54%
Symmetry, form, and shape: Guiding principles for robustness in macromolecular machines 2006 147 102 67%
Normal Mode Analysis of Biomolecular Structures: Functional Mechanisms of Membrane Proteins 2010 125 362 31%
Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes 2005 263 76 59%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 LH BAKER BIOINFORMAT BIOL STAT 12 42% 1.4% 23
2 SACKLER MOL MED 8 15% 2.9% 48
3 MOL STRUCT SECT 8 45% 0.8% 13
4 BAKER BIOINFORMAT BIOL SCI 6 100% 0.2% 4
5 BIOMED HLTH INFORMAT PROGRAM 4 46% 0.4% 6
6 ITP SB 3 50% 0.2% 4
7 COMPUTAT INFORMAT BIOL MED TRAINING PROGRAM 3 60% 0.2% 3
8 COMPUTAT BIOL UNIT UNI 2 67% 0.1% 2
9 CANC NANOBIOL PROGRAM 2 10% 1.2% 20
10 QUANTITAT BIOL MODELING INITIAT 2 50% 0.2% 3

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000108954 MARKOV STATE MODELS//TRANSITION PATH SAMPLING//TRANSITION PATH THEORY
2 0.0000097068 BIOPHYS MODELING SIMULAT//ALL ATOM RECONSTRUCTION//BIOL MODELING SIMULAT
3 0.0000089811 CORRELATED MUTATIONS//CONTACT PREDICTION//CONTACT MAP PREDICTION
4 0.0000087473 ENVIRONM IND CHEM//ONE STEP PERTURBATION//SAMPL4
5 0.0000087002 UNITA RIC ROMA TRE//DYNAMICAL TRANSITION//UFR PHITEM
6 0.0000082358 CROSS CORRELATED RELAXATION//N 15 RELAXATION//NMR SPIN RELAXATION
7 0.0000077386 LOOP PREDICTION//LOOP MODELING//STEPWISE FOLDING
8 0.0000076985 CAPRI//PROTEIN PROTEIN DOCKING//PROTEIN DOCKING
9 0.0000074766 PROTEIN HYDRATION//INTERNAL SOLVENT//SOLVENT MODELING
10 0.0000072711 PROTEIN FOLDING//PHI VALUE//CONTACT ORDER