Class information for:
Level 1: JOURNAL OF BIOMEDICAL SEMANTICS//ZFIN//ZEBRAFISH INFORMAT NETWORK

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
4158 1760 30.0 67%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
238 19563 BIOINFORMATICS//BMC BIOINFORMATICS//GENOME RESEARCH

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 JOURNAL OF BIOMEDICAL SEMANTICS Journal 34 40% 4% 67
2 ZFIN Address 27 83% 1% 15
3 ZEBRAFISH INFORMAT NETWORK Address 21 90% 1% 9
4 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION Journal 14 17% 4% 75
5 DATABASE LIFE SCI Address 9 41% 1% 17
6 IFOMIS Address 9 59% 1% 10
7 FORMAL ONTOL MED INFORMAT SCI Address 9 47% 1% 14
8 BIO ONTOLOGY Author keyword 8 70% 0% 7
9 OBO Author keyword 8 75% 0% 6
10 MOUSE GENOME INFORMAT Address 8 56% 1% 10

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 BIO ONTOLOGY 8 70% 0% 7 Search BIO+ONTOLOGY Search BIO+ONTOLOGY
2 OBO 8 75% 0% 6 Search OBO Search OBO
3 BIOMEDICAL ONTOLOGIES 4 21% 1% 16 Search BIOMEDICAL+ONTOLOGIES Search BIOMEDICAL+ONTOLOGIES
4 BIOLOGICAL ONTOLOGIES 3 60% 0% 3 Search BIOLOGICAL+ONTOLOGIES Search BIOLOGICAL+ONTOLOGIES
5 REFERENT TRACKING 2 44% 0% 4 Search REFERENT+TRACKING Search REFERENT+TRACKING
6 BIOEXTRACT SERVER 2 67% 0% 2 Search BIOEXTRACT+SERVER Search BIOEXTRACT+SERVER
7 BIOHACKATHON 2 67% 0% 2 Search BIOHACKATHON Search BIOHACKATHON
8 BIOMEDICAL VOCABULARY 2 67% 0% 2 Search BIOMEDICAL+VOCABULARY Search BIOMEDICAL+VOCABULARY
9 ONTOLOGICAL METHODOLOGY 2 67% 0% 2 Search ONTOLOGICAL+METHODOLOGY Search ONTOLOGICAL+METHODOLOGY
10 PATO 2 67% 0% 2 Search PATO Search PATO

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 BIO ONTOLOGIES 28 68% 1% 25
2 BIOMEDICAL ONTOLOGIES 26 61% 2% 27
3 PHENOTYPE ONTOLOGY 18 61% 1% 19
4 OBO 17 75% 1% 12
5 BIOINFORMATICS 15 11% 7% 129
6 GENE ONTOLOGY 15 11% 7% 130
7 ANATOMY ONTOLOGY 13 80% 0% 8
8 MODEL ORGANISM DATABASE 13 49% 1% 19
9 MGD 9 67% 0% 8
10 OBO FOUNDRY 9 67% 0% 8

Journals


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 JOURNAL OF BIOMEDICAL SEMANTICS 34 40% 4% 67
2 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 14 17% 4% 75
3 APPLIED ONTOLOGY 2 16% 1% 11

Reviews


Title Publ. year Cit. Active
references		 % act. ref.
to same field
The Human Phenotype Ontology 2010 105 47 30%
Ontologies in biology: Design, applications and future challenges 2004 145 22 36%
Cross-organism analysis using InterMine 2015 1 29 59%
Roles and Applications of Biomedical Ontologies in Experimental Animal Science 2012 0 14 93%
Thematic series on biomedical ontologies in JBMS: challenges and new directions 2014 2 29 69%
Zea mays ontology - a database of international terms 2003 12 1 100%
Open PHACTS: semantic interoperability for drug discovery 2012 49 21 29%
Phenotype Ontologies and Cross-Species Analysis for Translational Research 2014 6 76 47%
Bringing Ontology to the Gene Ontology 2003 7 1 100%
Biological knowledge management: the emerging role of the Semantic Web technologies 2009 46 92 46%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 ZFIN 27 83% 0.9% 15
2 ZEBRAFISH INFORMAT NETWORK 21 90% 0.5% 9
3 DATABASE LIFE SCI 9 41% 1.0% 17
4 IFOMIS 9 59% 0.6% 10
5 FORMAL ONTOL MED INFORMAT SCI 9 47% 0.8% 14
6 MOUSE GENOME INFORMAT 8 56% 0.6% 10
7 ONTOL DEV GRP 6 80% 0.2% 4
8 POMBASE 6 100% 0.2% 4
9 FLYBASE 5 47% 0.5% 8
10 WORMBASE 5 55% 0.3% 6

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000170142 CIRCOS//BIODADOS//ORTHOLOGY
2 0.0000141367 NEUROINFORMATICS//NEURODATABASES//XNAT
3 0.0000138234 TEXT MIN//COMPUTAT PHARMACOL//BIOMEDICAL TEXT MINING
4 0.0000119699 EMBL OUTSTN//PROT INFORMAT OURCE//HLTH SCI TECHNOL ICIR
5 0.0000114896 CELLML//BIOINFORMAT TUEBINGEN ZBIT//SCI DATABASES VISUALIZAT GRP
6 0.0000100679 BIOMAG BANK//PDBJ//RCSB PROT DATA BANK
7 0.0000097318 JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION//CISMEF//ABSTRACTION NETWORK
8 0.0000096122 CIS MOTIF//ARABIDOPSIS T87 CELL LINE//GENE ATLAS
9 0.0000081431 JOURNAL OF CHEMINFORMATICS//INCHI//CHEMICAL MARKUP LANGUAGE
10 0.0000079448 PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORK