Class information for:
Level 1: FLUX BALANCE ANALYSIS//CONSTRAINT BASED MODELING//METABOLIC NETWORK

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
2492 2156 45.1 79%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
584 13517 BMC SYSTEMS BIOLOGY//FLUX BALANCE ANALYSIS//SYNTHETIC BIOLOGY

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 FLUX BALANCE ANALYSIS Author keyword 120 57% 7% 141
2 CONSTRAINT BASED MODELING Author keyword 52 62% 3% 54
3 METABOLIC NETWORK Author keyword 43 38% 4% 90
4 ELEMENTARY FLUX MODES Author keyword 36 70% 1% 30
5 METABOLIC NETWORKS Author keyword 34 37% 3% 74
6 ELEMENTARY MODES Author keyword 32 78% 1% 21
7 METABOLIC NETWORK RECONSTRUCTION Author keyword 27 92% 1% 11
8 BMC SYSTEMS BIOLOGY Journal 20 12% 7% 161
9 GENOME SCALE METABOLIC MODEL Author keyword 16 51% 1% 23
10 GENOME SCALE MODEL Author keyword 16 65% 1% 15

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 FLUX BALANCE ANALYSIS 120 57% 7% 141 Search FLUX+BALANCE+ANALYSIS Search FLUX+BALANCE+ANALYSIS
2 CONSTRAINT BASED MODELING 52 62% 3% 54 Search CONSTRAINT+BASED+MODELING Search CONSTRAINT+BASED+MODELING
3 METABOLIC NETWORK 43 38% 4% 90 Search METABOLIC+NETWORK Search METABOLIC+NETWORK
4 ELEMENTARY FLUX MODES 36 70% 1% 30 Search ELEMENTARY+FLUX+MODES Search ELEMENTARY+FLUX+MODES
5 METABOLIC NETWORKS 34 37% 3% 74 Search METABOLIC+NETWORKS Search METABOLIC+NETWORKS
6 ELEMENTARY MODES 32 78% 1% 21 Search ELEMENTARY+MODES Search ELEMENTARY+MODES
7 METABOLIC NETWORK RECONSTRUCTION 27 92% 1% 11 Search METABOLIC+NETWORK+RECONSTRUCTION Search METABOLIC+NETWORK+RECONSTRUCTION
8 GENOME SCALE METABOLIC MODEL 16 51% 1% 23 Search GENOME+SCALE+METABOLIC+MODEL Search GENOME+SCALE+METABOLIC+MODEL
9 GENOME SCALE MODEL 16 65% 1% 15 Search GENOME+SCALE+MODEL Search GENOME+SCALE+MODEL
10 ELEMENTARY MODE ANALYSIS 15 63% 1% 15 Search ELEMENTARY+MODE+ANALYSIS Search ELEMENTARY+MODE+ANALYSIS

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 FLUX BALANCE ANALYSIS 223 65% 10% 212
2 PATHWAY ANALYSIS 95 43% 8% 166
3 BALANCE ANALYSIS 82 77% 3% 56
4 KNOCKOUT STRATEGIES 72 93% 1% 27
5 GENOME SCALE RECONSTRUCTION 64 74% 2% 48
6 GLOBAL RECONSTRUCTION 64 79% 2% 41
7 IN SILICO MODELS 43 69% 2% 37
8 MINIMAL CUT SETS 42 78% 1% 28
9 FLUX BALANCE MODELS 35 76% 1% 25
10 GENOME SCALE MODELS 31 71% 1% 25

Journals


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 BMC SYSTEMS BIOLOGY 20 12% 7% 161
2 IEE PROCEEDINGS SYSTEMS BIOLOGY 1 12% 0% 10

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Constraint-based models predict metabolic and associated cellular functions 2014 37 102 75%
Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods 2012 140 140 93%
Metabolic Cancer Biology: Structural-based analysis of cancer as a metabolic disease, new sights and opportunities for disease treatment 2015 3 103 55%
Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli 2013 51 131 76%
The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli 2008 236 98 83%
Applications of genome-scale metabolic reconstructions 2009 255 152 60%
Reconstruction of biochemical networks in microorganisms 2009 322 121 43%
Genome-scale models of microbial cells: Evaluating the consequences of constraints 2004 519 96 78%
Computing the functional proteome: recent progress and future prospects for genome-scale models 2015 2 90 44%
Analysis of omics data with genome-scale models of metabolism 2013 28 60 67%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 COMPUTAT SYST BIOTECHNOL 7 42% 0.6% 13
2 METAB BIOMOL ENGN 6 18% 1.3% 29
3 IND ENGN MECH ENGN COMP SCI 5 27% 0.8% 17
4 ARTIFICIAL INTELLIGENCE BIOINFORMAT GRP 5 35% 0.5% 11
5 BIO SYST ANAL GRP 5 31% 0.6% 13
6 JCB 4 56% 0.2% 5
7 SYST BIOL MATH MODELING GRP 4 32% 0.5% 10
8 GORTNER 240 3 32% 0.4% 9
9 BIOCOMP STRUCT PROGRAM 3 100% 0.1% 3
10 CELL SYST MODELLING GRP 3 100% 0.1% 3

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000235807 METABOLIC FLUX ANALYSIS//RAPID SAMPLING//INTRACELLULAR METABOLITES
2 0.0000189076 CELLML//BIOINFORMAT TUEBINGEN ZBIT//SCI DATABASES VISUALIZAT GRP
3 0.0000122250 METABOLIC CONTROL ANALYSIS//CONTROL COEFFICIENT//CONTROL COEFFICIENTS
4 0.0000105471 BIOCHEMICAL SYSTEMS THEORY//S SYSTEM//S DISTRIBUTION
5 0.0000091911 ACTINOBACILLUS SUCCINOGENES//SUCCINIC ACID//ANAEROBIOSPIRILLUM SUCCINICIPRODUCENS
6 0.0000090692 PROGRAM COMPUTAT GENOM//CIFN//PROGRAMA GENOM COMPUTAC
7 0.0000087156 ESSENTIAL GENES//SUBTRACTIVE GENOMICS//ESSENTIAL GENE
8 0.0000085462 CYBERNETIC MODELING//SUBSTITUTABLE SUBSTRATES//CYBERNETIC MODELS
9 0.0000066337 DIRECTED HYPERGRAPHS//SUBSET GRAPH//SET THEORETIC ALGORITHMS
10 0.0000062058 PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORK