Class information for: |
Basic class information |
| ID | Publications | Average number of references |
Avg. shr. active ref. in WoS |
|---|---|---|---|
| 21380 | 362 | 40.8 | 72% |
Classes in level above (level 2) |
| ID, lev. above |
Publications | Label for level above |
|---|---|---|
| 42 | 31225 | PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//PROTEIN FOLDING |
Terms with highest relevance score |
| Rank | Term | Type of term | Relevance score (tfidf) |
Class's shr. of term's tot. occurrences |
Shr. of publ. in class containing term |
Num. of publ. in class |
|---|---|---|---|---|---|---|
| 1 | LOOP PREDICTION | Author keyword | 20 | 66% | 5% | 19 |
| 2 | LOOP MODELING | Author keyword | 11 | 39% | 6% | 22 |
| 3 | STEPWISE FOLDING | Author keyword | 6 | 100% | 1% | 4 |
| 4 | PROTEIN LOOPS | Author keyword | 4 | 42% | 2% | 8 |
| 5 | LOOP CONFORMATION | Author keyword | 4 | 50% | 2% | 6 |
| 6 | LOOP CLOSURE | Author keyword | 3 | 21% | 4% | 14 |
| 7 | ALL ATOM FORCE FIELD | Author keyword | 2 | 44% | 1% | 4 |
| 8 | COMMON FOLD | Author keyword | 2 | 67% | 1% | 2 |
| 9 | MEAN FIELD TECHNIQUE | Author keyword | 2 | 67% | 1% | 2 |
| 10 | PROTEIN LOOP STRUCTURE | Author keyword | 2 | 67% | 1% | 2 |
Web of Science journal categories |
Author Key Words |
| Rank | Web of Science journal category | Relevance score (tfidf) |
Class's shr. of term's tot. occurrences |
Shr. of publ. in class containing term |
Num. of publ. in class |
LCSH search | Wikipedia search |
|---|---|---|---|---|---|---|---|
| 1 | LOOP PREDICTION | 20 | 66% | 5% | 19 | Search LOOP+PREDICTION | Search LOOP+PREDICTION |
| 2 | LOOP MODELING | 11 | 39% | 6% | 22 | Search LOOP+MODELING | Search LOOP+MODELING |
| 3 | STEPWISE FOLDING | 6 | 100% | 1% | 4 | Search STEPWISE+FOLDING | Search STEPWISE+FOLDING |
| 4 | PROTEIN LOOPS | 4 | 42% | 2% | 8 | Search PROTEIN+LOOPS | Search PROTEIN+LOOPS |
| 5 | LOOP CONFORMATION | 4 | 50% | 2% | 6 | Search LOOP+CONFORMATION | Search LOOP+CONFORMATION |
| 6 | LOOP CLOSURE | 3 | 21% | 4% | 14 | Search LOOP+CLOSURE | Search LOOP+CLOSURE |
| 7 | ALL ATOM FORCE FIELD | 2 | 44% | 1% | 4 | Search ALL+ATOM+FORCE+FIELD | Search ALL+ATOM+FORCE+FIELD |
| 8 | COMMON FOLD | 2 | 67% | 1% | 2 | Search COMMON+FOLD | Search COMMON+FOLD |
| 9 | MEAN FIELD TECHNIQUE | 2 | 67% | 1% | 2 | Search MEAN+FIELD+TECHNIQUE | Search MEAN+FIELD+TECHNIQUE |
| 10 | PROTEIN LOOP STRUCTURE | 2 | 67% | 1% | 2 | Search PROTEIN+LOOP+STRUCTURE | Search PROTEIN+LOOP+STRUCTURE |
Key Words Plus |
| Rank | Web of Science journal category | Relevance score (tfidf) |
Class's shr. of term's tot. occurrences |
Shr. of publ. in class containing term |
Num. of publ. in class |
|---|---|---|---|---|---|
| 1 | REGULAR SECONDARY STRUCTURES | 19 | 74% | 4% | 14 |
| 2 | AB INITIO CONSTRUCTION | 17 | 57% | 6% | 20 |
| 3 | SUPER SECONDARY STRUCTURES | 12 | 75% | 2% | 9 |
| 4 | ANTIBODY HYPERVARIABLE LOOPS | 10 | 57% | 3% | 12 |
| 5 | STRUCTURALLY VARIABLE REGIONS | 8 | 70% | 2% | 7 |
| 6 | BETA PROTEINS | 8 | 75% | 2% | 6 |
| 7 | POLYPEPTIDE FRAGMENTS | 8 | 32% | 6% | 21 |
| 8 | POLYPEPTIDE SEGMENTS | 7 | 46% | 3% | 11 |
| 9 | LOCAL OPTIMIZATION PROGRAM | 6 | 47% | 2% | 9 |
| 10 | DECOY DISCRIMINATION | 6 | 100% | 1% | 4 |
Journals |
Reviews |
| Title | Publ. year | Cit. | Active references | % act. ref. to same field |
|---|---|---|---|---|
| Modeling of loops in protein structures | 2000 | 837 | 124 | 30% |
| Modeling Structures and Motions of Loops in Protein Molecules | 2012 | 7 | 123 | 46% |
| Two Mechanisms of Protein Folding: A Theoretical Analysis | 2014 | 0 | 8 | 100% |
| Structures closed into cycles in globular proteins | 2011 | 0 | 14 | 64% |
| Analysis of loop boundaries using different local structure assignment methods | 2009 | 4 | 95 | 26% |
| STANDARD STRUCTURES IN PROTEINS | 1993 | 88 | 60 | 20% |
| Computational screening of combinatorial libraries via multicopy sampling | 1997 | 7 | 32 | 50% |
| Optimization of the GB/SA solvation model for predicting the structure of surface loops in proteins | 2006 | 4 | 106 | 33% |
| The Protein Local Optimization Program and G-Protein-Coupled Receptors: Loop Restoration and Applications to Homology Modeling | 2013 | 0 | 19 | 32% |
| COMPARATIVE MODELING OF HOMOLOGOUS PROTEINS | 1991 | 69 | 21 | 29% |
Address terms |
| Rank | Address term | Relevance score (tfidf) |
Class's shr. of term's tot. occurrences |
Shr. of publ. in class containing term |
Num. of publ. in class |
|---|---|---|---|---|---|
| 1 | DARCY THOMPSON COMPUTAT BIOL | 1 | 50% | 0.6% | 2 |
| 2 | PHYS CHEM ROCASOLANO IQFR | 1 | 100% | 0.6% | 2 |
| 3 | SEAVER FDN BIOINFORMAT | 1 | 29% | 1.1% | 4 |
| 4 | CHAIR COMP SCI 5 | 1 | 50% | 0.3% | 1 |
| 5 | IMIM BIOINFORMAT ESTRUCTURAL | 1 | 50% | 0.3% | 1 |
| 6 | CRYSTALLOG BIOPHYS GUINDY CAMPUS | 0 | 33% | 0.3% | 1 |
| 7 | DSIMBINTS | 0 | 33% | 0.3% | 1 |
| 8 | MOL INTEGRAT PHYSIOL BIOCHEM | 0 | 33% | 0.3% | 1 |
| 9 | STRUCT BIOINFORMAT GRIB IMIM | 0 | 33% | 0.3% | 1 |
| 10 | BIOINFORMAT ESTRUCT | 0 | 25% | 0.3% | 1 |
Related classes at same level (level 1) |
| Rank | Relatedness score | Related classes |
|---|---|---|
| 1 | 0.0000258553 | BIOINFORMAT TELEMED//HYDROPHOBICITY DEFICIENCY//HELIX INTERACTIONS |
| 2 | 0.0000243668 | COMPUTATIONAL PROTEIN DESIGN//DEAD END ELIMINATION//COMPUTATIONAL ENZYME DESIGN |
| 3 | 0.0000218223 | PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//CASP |
| 4 | 0.0000178322 | CANONICAL STRUCTURES//CDR CONFORMATION//ANTIBODY STRUCTURE |
| 5 | 0.0000149358 | SECONDARY STRUCTURE PREDICTION//PROTEIN SECONDARY STRUCTURE PREDICTION//COMPOUND PYRAMID MODEL |
| 6 | 0.0000134143 | HP MODEL//STATISTICAL POTENTIALS//PROTEIN STRUCTURE PREDICTION |
| 7 | 0.0000125384 | BAKER CHEM CHEM BIOL//REPLICA EXCHANGE METHOD//GENERALIZED ENSEMBLE ALGORITHM |
| 8 | 0.0000120731 | NAKA WORKS//CYCLOALCANES//CONFORMATIONAL POPULATION |
| 9 | 0.0000099324 | BETA HAIRPIN//SIDE CHAIN INTERACTIONS//TRP CAGE |
| 10 | 0.0000077386 | ELASTIC NETWORK MODEL//ELASTIC NETWORK MODELS//NORMAL MODE ANALYSIS |