Class information for:
Level 1: CORRELATED MUTATIONS//CONTACT PREDICTION//CONTACT MAP PREDICTION

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
18572 480 37.2 77%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
42 31225 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//PROTEIN FOLDING

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 CORRELATED MUTATIONS Author keyword 11 47% 4% 17
2 CONTACT PREDICTION Author keyword 7 53% 2% 10
3 CONTACT MAP PREDICTION Author keyword 7 67% 1% 6
4 INVERSE ISING PROBLEM Author keyword 6 100% 1% 4
5 RESIDUE RESIDUE CONTACT Author keyword 4 67% 1% 4
6 AMINO ACID CONTACTS Author keyword 4 75% 1% 3
7 DIRECT COUPLING ANALYSIS Author keyword 4 75% 1% 3
8 RESIDUE CONTACT PREDICTION Author keyword 4 75% 1% 3
9 PROTEIN CONTACT MAP Author keyword 3 57% 1% 4
10 CORRELATED SUBSTITUTIONS Author keyword 3 100% 1% 3

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 CORRELATED MUTATIONS 11 47% 4% 17 Search CORRELATED+MUTATIONS Search CORRELATED+MUTATIONS
2 CONTACT PREDICTION 7 53% 2% 10 Search CONTACT+PREDICTION Search CONTACT+PREDICTION
3 CONTACT MAP PREDICTION 7 67% 1% 6 Search CONTACT+MAP+PREDICTION Search CONTACT+MAP+PREDICTION
4 INVERSE ISING PROBLEM 6 100% 1% 4 Search INVERSE+ISING+PROBLEM Search INVERSE+ISING+PROBLEM
5 RESIDUE RESIDUE CONTACT 4 67% 1% 4 Search RESIDUE+RESIDUE+CONTACT Search RESIDUE+RESIDUE+CONTACT
6 AMINO ACID CONTACTS 4 75% 1% 3 Search AMINO+ACID+CONTACTS Search AMINO+ACID+CONTACTS
7 DIRECT COUPLING ANALYSIS 4 75% 1% 3 Search DIRECT+COUPLING+ANALYSIS Search DIRECT+COUPLING+ANALYSIS
8 RESIDUE CONTACT PREDICTION 4 75% 1% 3 Search RESIDUE+CONTACT+PREDICTION Search RESIDUE+CONTACT+PREDICTION
9 PROTEIN CONTACT MAP 3 57% 1% 4 Search PROTEIN+CONTACT+MAP Search PROTEIN+CONTACT+MAP
10 CORRELATED SUBSTITUTIONS 3 100% 1% 3 Search CORRELATED+SUBSTITUTIONS Search CORRELATED+SUBSTITUTIONS

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 CORRELATED MUTATIONS 74 46% 25% 120
2 RESIDUE CONTACTS 61 62% 13% 63
3 CONTACT PREDICTION 26 56% 6% 31
4 MULTIPLE SEQUENCE ALIGNMENTS 13 20% 12% 59
5 CORRELATED MUTATION ANALYSIS 12 86% 1% 6
6 ALLOSTERIC COMMUNICATION 11 38% 5% 23
7 COEVOLVING RESIDUES 11 100% 1% 6
8 COEVOLVING POSITIONS 10 50% 3% 14
9 INTERRESIDUE CONTACTS 9 83% 1% 5
10 BOLTZMANN MACHINES 9 30% 5% 24

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Emerging methods in protein co-evolution 2013 71 102 36%
Protein structure prediction from sequence variation 2012 59 49 47%
Soft computing methods for the prediction of protein tertiary structures: A survey 2015 0 76 49%
Evolution-Based Design of Proteins 2013 6 25 28%
Protein Engineering and Stabilization from Sequence Statistics: Variation and Covariation Analysis 2013 3 36 36%
Context dependence and coevolution among amino acid residues in proteins 2005 16 29 48%
Inferring Pairwise Interactions from Biological Data Using Maximum-Entropy Probability Models 2015 0 49 47%
Using Analyses of Amino Acid Coevolution to Understand Protein Structure and Function 2013 1 55 40%
The functional importance of co-evolving residues in proteins 2014 2 82 17%
Protein co-evolution: how do we combine bioinformatics and experimental approaches? 2013 7 59 19%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ.
in class
1 EVOLUTIONARY GENET BIOINFORMAT 2 33% 0.8% 4
2 GENOM MICROORGANISMES 1 20% 1.3% 6
3 FINE CHEM ADV SYNTH CATALYSIS 1 50% 0.2% 1
4 GENETEVOLUTIONARY GENET BIOINFORMAT 1 50% 0.2% 1
5 GENETSMURFIT GENET 1 50% 0.2% 1
6 LECCE SPACI CONSORTIUM 1 50% 0.2% 1
7 MFG TEST 1 50% 0.2% 1
8 OURCE BIOCOMP VISUALIZAT INFORMAT 1 50% 0.2% 1
9 RWCP SNN 1 50% 0.2% 1
10 UMR CNRS INSERM 1083 6214 1 50% 0.2% 1

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000142901 PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//CASP
2 0.0000126526 SECONDARY STRUCTURE PREDICTION//PROTEIN SECONDARY STRUCTURE PREDICTION//COMPOUND PYRAMID MODEL
3 0.0000120209 HP MODEL//STATISTICAL POTENTIALS//PROTEIN STRUCTURE PREDICTION
4 0.0000116514 BLAST SEARCH//GENES FOR BASIC HELIX LOOP HELIX PROTEINS//ORTHOLOGOUS FAMILY
5 0.0000103696 MEAN FIELD VARIATIONAL BAYES//EXPECTATION PROPAGATION//GAUSSIAN PROCESSES MODEL
6 0.0000089811 ELASTIC NETWORK MODEL//ELASTIC NETWORK MODELS//NORMAL MODE ANALYSIS
7 0.0000089550 COMPLEX SCI SOFTWARE//3D ZERNIKE DESCRIPTOR//PROTEIN SURFACE SHAPE
8 0.0000074492 SATISFIABILITY//MESSAGE PASSING ALGORITHMS//CAVITY AND REPLICA METHOD
9 0.0000060238 DEEP LEARNING//HIERARCHICAL FEATURE LEARNING//RESTRICTED BOLTZMANN MACHINES
10 0.0000058669 CODON MODEL//HETEROTACHY//PHYLOGENETIC INVARIANTS