Class information for:
Level 1: CIRCOS//BIODADOS//ORTHOLOGY

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
18304 493 30.5 83%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
238 19563 BIOINFORMATICS//BMC BIOINFORMATICS//GENOME RESEARCH

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 CIRCOS Author keyword 4 75% 1% 3
2 BIODADOS Address 3 43% 1% 6
3 ORTHOLOGY Author keyword 3 15% 3% 17
4 BERKELEY PHYLOGENOM GRP Address 2 67% 0% 2
5 BIDIRECTIONAL BEST HIT Author keyword 2 67% 0% 2
6 GENOMIC DATA VISUALIZATION Author keyword 1 100% 0% 2
7 RECIPROCAL BEST HIT Author keyword 1 100% 0% 2
8 XENOLOG Author keyword 1 100% 0% 2
9 BIOINFORMAT GENOM PROGRAMME Address 1 11% 2% 10
10 DATA INTEGRAT ANAL IL Address 1 30% 1% 3

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 CIRCOS 4 75% 1% 3 Search CIRCOS Search CIRCOS
2 ORTHOLOGY 3 15% 3% 17 Search ORTHOLOGY Search ORTHOLOGY
3 BIDIRECTIONAL BEST HIT 2 67% 0% 2 Search BIDIRECTIONAL+BEST+HIT Search BIDIRECTIONAL+BEST+HIT
4 GENOMIC DATA VISUALIZATION 1 100% 0% 2 Search GENOMIC+DATA+VISUALIZATION Search GENOMIC+DATA+VISUALIZATION
5 RECIPROCAL BEST HIT 1 100% 0% 2 Search RECIPROCAL+BEST+HIT Search RECIPROCAL+BEST+HIT
6 XENOLOG 1 100% 0% 2 Search XENOLOG Search XENOLOG
7 ORTHOLOG 1 10% 2% 10 Search ORTHOLOG Search ORTHOLOG
8 ALL AGAINST ALL 1 50% 0% 1 Search ALL+AGAINST+ALL Search ALL+AGAINST+ALL
9 ANNOTATION PIPELINES 1 50% 0% 1 Search ANNOTATION+PIPELINES Search ANNOTATION+PIPELINES
10 AP1PMA 1 50% 0% 1 Search AP1PMA Search AP1PMA

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 PARALOGS 12 35% 6% 29
2 ORTHOMCL 8 52% 2% 11
3 ORTHOLOGY 5 40% 2% 10
4 COG DATABASE 5 17% 6% 28
5 ORTHOLOGS 4 15% 5% 24
6 AUTOMATED CONSTRUCTION 3 57% 1% 4
7 MULTIPLE GENOMES 3 100% 1% 3
8 BIOINFORMATICS RESOURCE UPDATE 2 67% 0% 2
9 CGVIEW 2 67% 0% 2
10 MBGD 2 67% 0% 2

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Large-scale assignment of orthology: back to phylogenetics? 2008 40 33 52%
Orthologs, paralogs, and evolutionary genomics 2005 377 67 13%
In Silico Bioinformatic Tools for Determining Core Genes From Sets of Genomes 2011 0 23 52%
The genome browser at UCSC for locating genes, and much more! 2008 8 9 33%
Computer-Assisted Automatic Classifications, Storage, Queries and Functional Assignments of Orthologs and In-Paralogs Proteins 2009 1 131 36%
Orthology and functional conservation in eukaryotes 2007 26 53 25%
A reference guide for tree analysis and visualization 2010 8 53 23%
Space, time, form: viewing the Tree of Life 2012 5 36 19%
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes 2004 181 113 5%
Homology and phylogeny and their automated inference 2008 2 72 21%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 BIODADOS 3 43% 1.2% 6
2 BERKELEY PHYLOGENOM GRP 2 67% 0.4% 2
3 BIOINFORMAT GENOM PROGRAMME 1 11% 2.0% 10
4 DATA INTEGRAT ANAL IL 1 30% 0.6% 3
5 CUBE COMPUTAT SYST BIOL 1 33% 0.4% 2
6 DWT 1 50% 0.2% 1
7 HEIDELBERG PERSONALIZED ONCOL DKFZ HIPO 1 50% 0.2% 1
8 HIPERSOFT 1 50% 0.2% 1
9 INRA BIOTECHNOL CHAMPIGNONS FILAMENTEUXUMR 1163 1 50% 0.2% 1
10 LECCE SPACI CONSORTIUM 1 50% 0.2% 1

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000195316 STANDARDS IN GENOMIC SCIENCES//BIOL DATA MANAGEMENT TECHNOL//GEBA
2 0.0000170142 JOURNAL OF BIOMEDICAL SEMANTICS//ZFIN//ZEBRAFISH INFORMAT NETWORK
3 0.0000157358 EVOLUTIONARY BIOINFORMAT//CLOSED LOOPS//SKEW PAIRS
4 0.0000153292 WHOLE GENOME DUPLICATION//GENET MOL CELLULAIRE ECT LEVU INTERE//GENOME DUPLICATION
5 0.0000150811 EMBL OUTSTN//PROT INFORMAT OURCE//HLTH SCI TECHNOL ICIR
6 0.0000143860 TREE OF LIFE//HORIZONTAL GENE TRANSFER//LATERAL GENE TRANSFER
7 0.0000137618 PROGRAM COMPUTAT GENOM//CIFN//PROGRAMA GENOM COMPUTAC
8 0.0000135503 GENOME REARRANGEMENTS//SORTING BY REVERSALS//BREAKPOINT GRAPH
9 0.0000112038 PHYLOGENETIC NETWORK//PHYLOGENETIC NETWORKS//TIGHT SPAN
10 0.0000103878 MULTIPLE SEQUENCE ALIGNMENT//T COFFEE//STATISTICAL ALIGNMENT