Class information for:
Level 1: BIOPHYS MODELING SIMULAT//ALL ATOM RECONSTRUCTION//BIOL MODELING SIMULAT

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
12297 852 51.4 81%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
1799 5759 DISSIPATIVE PARTICLE DYNAMICS//FLUCTUATING HYDRODYNAMICS//MADELUNG CONSTANT

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 BIOPHYS MODELING SIMULAT Address 9 25% 4% 33
2 ALL ATOM RECONSTRUCTION Author keyword 3 100% 0% 3
3 BIOL MODELING SIMULAT Address 3 100% 0% 3
4 LIPID SIMULATION Author keyword 2 67% 0% 2
5 COARSE GRAINED Author keyword 2 12% 2% 15
6 BOX SHAPE Author keyword 1 50% 0% 2
7 COARSE GRAINING MODELS Author keyword 1 100% 0% 2
8 COARSE GRAINING SIMULATION Author keyword 1 100% 0% 2
9 ELECTRIC MULTIPOLE POTENTIAL Author keyword 1 100% 0% 2
10 MARTINI FORCEFIELD Author keyword 1 100% 0% 2

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 ALL ATOM RECONSTRUCTION 3 100% 0% 3 Search ALL+ATOM+RECONSTRUCTION Search ALL+ATOM+RECONSTRUCTION
2 LIPID SIMULATION 2 67% 0% 2 Search LIPID+SIMULATION Search LIPID+SIMULATION
3 COARSE GRAINED 2 12% 2% 15 Search COARSE+GRAINED Search COARSE+GRAINED
4 BOX SHAPE 1 50% 0% 2 Search BOX+SHAPE Search BOX+SHAPE
5 COARSE GRAINING MODELS 1 100% 0% 2 Search COARSE+GRAINING+MODELS Search COARSE+GRAINING+MODELS
6 COARSE GRAINING SIMULATION 1 100% 0% 2 Search COARSE+GRAINING+SIMULATION Search COARSE+GRAINING+SIMULATION
7 ELECTRIC MULTIPOLE POTENTIAL 1 100% 0% 2 Search ELECTRIC+MULTIPOLE+POTENTIAL Search ELECTRIC+MULTIPOLE+POTENTIAL
8 MARTINI FORCEFIELD 1 100% 0% 2 Search MARTINI+FORCEFIELD Search MARTINI+FORCEFIELD
9 MARTINI 1 33% 0% 3 Search MARTINI Search MARTINI
10 COARSE GRAIN 1 10% 1% 9 Search COARSE+GRAIN Search COARSE+GRAIN

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 FIT STRUCTURAL PROPERTIES 35 86% 2% 18
2 AUTOMATIC SIMPLEX OPTIMIZATION 23 79% 2% 15
3 ADAPTIVE RESOLUTION 18 89% 1% 8
4 MULTISCALE SIMULATIONS 13 48% 2% 20
5 COARSE GRAINING PROCEDURE 13 71% 1% 10
6 BIOMOLECULAR SYSTEMS 11 17% 7% 61
7 INTERACTING POLYMERIC ASSEMBLIES 9 83% 1% 5
8 COARSE GRAINED MODELS 8 25% 4% 30
9 COARSE GRAINED MODEL 7 12% 6% 55
10 VINYL POLYMER CHAINS 7 64% 1% 7

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
The power of coarse graining in biomolecular simulations 2014 35 164 51%
Systematic coarse-graining methods for soft matter simulations - a review 2013 46 85 73%
On developing coarse-grained models for biomolecular simulation: a review 2012 35 41 78%
Open boundary molecular dynamics 2015 3 63 46%
Thermodynamic consistency and other challenges in coarse-graining models 2015 1 30 90%
Coarse-Graining Methods for Computational Biology 2013 57 62 39%
Perspective on the Martini model 2013 95 316 25%
Multiscale simulation of soft matter systems - from the atomistic to the coarse-grained level and back 2009 103 56 71%
Coarse-grained molecular models of water: a review 2012 25 60 55%
How Good Are Coarse-Grained Polymer Models? A Comparison for Atactic Polystyrene 2012 17 40 70%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 BIOPHYS MODELING SIMULAT 9 25% 3.9% 33
2 BIOL MODELING SIMULAT 3 100% 0.4% 3
3 MD IM FA 1 100% 0.2% 2
4 CHIM VIVANTSERV INGN MOL PROT 1 40% 0.2% 2
5 MANU TURE FRANCAISE PNEUMAT MICHELIN 1 27% 0.4% 3
6 BIOPHYS COMPUTAT BIOL BIOCHEM 1 50% 0.1% 1
7 BIOPHYS MODELING GRP 1 50% 0.1% 1
8 EDUARD ZINTL ANORG PHYS CHEM 1 50% 0.1% 1
9 IST NANOSC 1 50% 0.1% 1
10 JSNN 1 50% 0.1% 1

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000232895 DISSIPATIVE PARTICLE DYNAMICS//DISSIPATIVE PARTICLE DYNAMICS DPD//INTERFACIAL DENSITY
2 0.0000161839 DYNAMICALLY ACCESSIBLE VOLUME//POLYETHYLENE OXIDE SULFONIC ACID//COMPUTATIONAL AND THEORETICAL POLYMER SCIENCE
3 0.0000132633 AMPHIPHILIC SOLUTION//COMPUTAT CHEM MODELING SIMULAT//PL PROBLEM PHYS
4 0.0000129424 HYDRATION PRESSURE//AREA PER LIPID//PHOSPHOLIPID HYDRATION
5 0.0000110637 ENVIRONM IND CHEM//ONE STEP PERTURBATION//SAMPL4
6 0.0000102449 EQUATION FREE//EQUATION FREE METHODS//COARSE INTEGRATION
7 0.0000101328 PENETRABLE SPHERE MODEL//GAUSSIAN CORE MODEL//INTERACTING LATTICE GAS
8 0.0000097068 ELASTIC NETWORK MODEL//ELASTIC NETWORK MODELS//NORMAL MODE ANALYSIS
9 0.0000084166 EWALD METHODS//EWALD SUM//CUTOFF METHOD
10 0.0000078460 SOFT CONDENSED MATTER PHYS INTERDISCIPLINAR//PASSIVE ENDOCYTOSIS//SPIO NANOPARTICLE